CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

orange1.1g019126m.g *(Citrus sinensis)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03106 (WRKY)	IPR003657	orange1.1g019126m.g	T356641_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.896	0.966
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.896	0.966
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.896	0.966
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.890	0.831
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.890	0.831
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.887	0.831
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.887	0.831
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.887	0.831
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.887	0.847
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.887	0.847
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.887	0.847
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.879	0.814
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.879	0.814
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.879	0.814
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.869	0.746
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.869	0.746
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.869	0.746
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.855	0.695
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.853	0.661
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.853	0.661
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.853	0.661
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.849	0.661
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.849	0.661
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.849	0.661
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.848	0.644
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.848	0.644
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.848	0.644
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.846	0.678
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.846	0.678
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.831	0.525
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.828	0.542
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.828	0.542
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.828	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.828	0.542
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.828	0.542
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.828	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.824	0.559
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.819	0.492
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.817	0.508
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.815	0.475
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.815	0.475
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
orange1.1g019126m	WRKY	163	221	SDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNHP

Links
Other WRKY family TFs
Other *Citrus sinensis* TFs

1563 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL013653	Aedes aegypti	AAEL013653	N
AALB008022	Anopheles albimanus	AALB008022	N
AARA002613	Anopheles arabiensis	AARA002613	N
AARA008085	Anopheles arabiensis	AARA008085	N
AATE004417	Anopheles atroparvus	AATE004417	N
ACEP26919	Atta cephalotes	ACEP26919	N
ACHR000830	Anopheles christyi	ACHR000830	N
ACHR003814	Anopheles christyi	ACHR003814	N
ACOM025760	Anopheles coluzzii	ACOM025760	N
ACUA017562	Anopheles culicifacies	ACUA017562	N
ACUA022967	Anopheles culicifacies	ACUA022967	N
ADAC005282	Anopheles darlingi	ADAC005282	N
ADIR001353	Anopheles dirus	ADIR001353	N
ADIR007200	Anopheles dirus	ADIR007200	N
AEPI005949	Anopheles epiroticus	AEPI005949	N
AEPI009152	Anopheles epiroticus	AEPI009152	N
AFAF013567	Anopheles farauti	AFAF013567	N
AFAF018377	Anopheles farauti	AFAF018377	N
AFUN001038	Anopheles funestus	AFUN001038	N
AFUN003868	Anopheles funestus	AFUN003868	N
AGAP000336	Anopheles gambiae	AGAP000336	N
AGAP007517	Anopheles gambiae	AGAP007517	N
AMAM019785	Anopheles maculatus	AMAM019785	N
AMEC000435	Anopheles melas	AMEC000435	N
AMEC017669	Anopheles melas	AMEC017669	N
AMEM008561	Anopheles merus	AMEM008561	N
AMEM015155	Anopheles merus	AMEM015155	N
AMIN005487	Anopheles minimus	AMIN005487	N
AMIN010411	Anopheles minimus	AMIN010411	N
AQUA004406	Anopheles quadriannulatus	AQUA004406	N
AQUA007272	Anopheles quadriannulatus	AQUA007272	N
ASIS017447	Anopheles sinensis	ASIS017447	N
ASTEI08810	Anopheles stephensi	ASTEI08810	N
BGIBMGA003121	Bombyx mori	BGIBMGA003121	N
Cflo_02113--XP_396371.3_APIME	Camponotus floridanus	Cflo_02113--XP_396371.3_APIME	N
CGI_10021242	Crassostrea gigas	CGI_10021242	N
CPIJ003789	Culex quinquefasciatus	CPIJ003789	N
CpipJ_CPIJ003789	Culex pipiens	CpipJ_CPIJ003789	N
DAPPUDRAFT_304868	Daphnia pulex	DAPPUDRAFT_304868	N
GA14764	Drosophila pseudoobscura	FBgn0074791	N
GF21727	Drosophila ananassae	FBgn0098727	N
GG18249	Drosophila erecta	FBgn0110465	N
GH11849	Drosophila grimshawi	FBgn0119328	N
GI14331	Drosophila mojavensis	FBgn0137084	N
GI15474	Drosophila mojavensis	FBgn0138223	N
GL16412	Drosophila persimilis	FBgn0154016	N
GM21561	Drosophila sechellia	FBgn0176441	N
GJ17285	Drosophila virilis	FBgn0204460	N
GJ19385	Drosophila virilis	FBgn0206528	N
GK16294	Drosophila willistoni	FBgn0218296	N
GE15780	Drosophila yakuba	FBgn0233345	N
Trf2	Drosophila melanogaster	FBgn0261793	N
GB45421	Apis mellifera	GB45421	N
HHAL006636-PA	Halyomorpha halys	HHAL006636-PA	N
HMEL012402	Heliconius melpomene	HMEL012402	N
Hsal_05746--XP_396371.3_APIME	Harpegnathos saltator	Hsal_05746--XP_396371.3_APIME	N
ISCW018321	Ixodes scapularis	ISCW018321	N
KGM_18877	Danaus plexippus	KGM_18877	N
L798_06110	Zootermopsis nevadensis	L798_06110	N
LCUP013707	Lucilia cuprina	LCUP013707	N
LLOJ009650	Lutzomyia longipalpis	LLOJ009650	N
MCINX007554	Melitaea cinxia	MCINX007554	N
MDOA002006	Musca domestica	MDOA002006	N
NV17354	Nasonia vitripennis	NV17354	N
PHUM375280	Pediculus humanus	PHUM375280	N
PPAI002384	Phlebotomus papatasi	PPAI002384	N
RPRC008747	Rhodnius prolixus	RPRC008747	N
SINV24562	Solenopsis invicta	SINV24562	N
SMAR014284	Strigamia maritima	SMAR014284	N
TC014666	Tribolium castaneum	TC014666	N
YQE_07182	Dendroctonus ponderosae	YQE_07182	N

orange1.1g019126m.g (Citrus sinensis) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1563 Related TFs

orange1.1g019126m.g **(Citrus sinensis)
WRKY**