Pavir.Ca02012 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ca02012 T356707_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.832 0.610
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.832 0.610
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.823 0.610
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.812 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca02012.1.p WRKY 109 169

Links

Other WRKY family TFs
Other Panicum virgatum TFs

286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29216.m000249 Ricinus communis 29216.m000249 I
30055.m001550 Ricinus communis 30055.m001550 I
30131.m007163 Ricinus communis 30131.m007163 I
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I
TGA6 Arabidopsis thaliana AT3G12250 D
TGA2 Arabidopsis thaliana AT5G06950 D
TGA5 Arabidopsis thaliana AT5G06960 D
BGIOSGA000624 Oryza indica BGIOSGA000624 I
BGIOSGA003265 Oryza indica BGIOSGA003265 I
BGIOSGA007726 Oryza indica BGIOSGA007726 I
Bo1g139470 Brassica oleracea Bo1g139470 I
Bo2g007460 Brassica oleracea Bo2g007460 I
Bo3g064830 Brassica oleracea Bo3g064830 I
Bo5g133550 Brassica oleracea Bo5g133550 I
Bo9g175710 Brassica oleracea Bo9g175710 I
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I
Bra001443 Brassica rapa Bra001443 I
Bra009241 Brassica rapa Bra009241 I
Bra028713 Brassica rapa Bra028713 I
Bra034767 Brassica rapa Bra034767 I
Bra038705 Brassica rapa Bra038705 I
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I
BRADI2G52860 Brachypodium distachyon BRADI2G52860 I
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I
Carubv10001409m.g Capsella rubella Carubv10001409m.g I
Carubv10001413m.g Capsella rubella Carubv10001413m.g I
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I
Ca_07057 Cicer arietinum Ca_07057 I
Ca_07170 Cicer arietinum Ca_07170 I
Ca_10901 Cicer arietinum Ca_10901 I
Ca_17971 Cicer arietinum Ca_17971 I
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I
Cla002918 Citrullus lanatus Cla002918 I
Cla008794 Citrullus lanatus Cla008794 I
Cla010092 Citrullus lanatus Cla010092 I
Cla017796 Citrullus lanatus Cla017796 I
Cla022393 Citrullus lanatus Cla022393 I
Cucsa.005120 Cucumis sativus Cucsa.005120 I
Cucsa.242870 Cucumis sativus Cucsa.242870 I
Cucsa.307820 Cucumis sativus Cucsa.307820 I
Cucsa.337740 Cucumis sativus Cucsa.337740 I
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I
F775_14171 Aegilops tauschii F775_14171 I
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I
AHBP-1B Arabidopsis lyrata fgenesh2_kg.6__644__AT5G06950.1 I
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I
GLYMA02G30220 Glycine max GLYMA02G30220 I
GLYMA03G28320 Glycine max GLYMA03G28320 I
GLYMA10G11985 Glycine max GLYMA10G11985 I
GLYMA10G44270 Glycine max GLYMA10G44270 I
GLYMA11G19026 Glycine max GLYMA11G19026 I
GLYMA12G09430 Glycine max GLYMA12G09430 I
GLYMA12G30990 Glycine max GLYMA12G30990 I
GLYMA13G26280 Glycine max GLYMA13G26280 I
GLYMA15G37220 Glycine max GLYMA15G37220 I
GLYMA19G31050 Glycine max GLYMA19G31050 I
GLYMA20G39050 Glycine max GLYMA20G39050 I
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I
GRMZM2G019907 Zea mays GRMZM2G019907 I
GRMZM2G030280 Zea mays GRMZM2G030280 I
GRMZM2G125243 Zea mays GRMZM2G125243 I
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I
GSMUA_Achr8G21670_001 Musa acuminata GSMUA_Achr8G21670_001 I
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D
LPERR01G10700 Leersia perrieri LPERR01G10700 I
LPERR01G29770 Leersia perrieri LPERR01G29770 I
LPERR05G17110 Leersia perrieri LPERR05G17110 I
Lus10008658.g Linum usitatissimum Lus10008658.g I
Lus10024140.g Linum usitatissimum Lus10024140.g I
Lus10026166.g Linum usitatissimum Lus10026166.g I
Lus10034296.g Linum usitatissimum Lus10034296.g I
Lus10041475.g Linum usitatissimum Lus10041475.g I
MDP0000145555 Malus domestica MDP0000145555 I
MDP0000250967 Malus domestica MDP0000250967 I
MDP0000262210 Malus domestica MDP0000262210 I
MDP0000300532 Malus domestica MDP0000300532 I
MDP0000301884 Malus domestica MDP0000301884 I
MDP0000307943 Malus domestica MDP0000307943 I
MDP0000320322 Malus domestica MDP0000320322 I
MDP0000320524 Malus domestica MDP0000320524 I
MDP0000536881 Malus domestica MDP0000536881 I
mgf001395m Mimulus guttatus mgf001395m I
mgf005858m Mimulus guttatus mgf005858m I
mgf025345m Mimulus guttatus mgf025345m I
MLOC_14596 Hordeum vulgare MLOC_14596 I
MTR_2g086420 Medicago truncatula MTR_2g086420 I
MTR_7g089800 Medicago truncatula MTR_7g089800 I
MTR_8g040120 Medicago truncatula MTR_8g040120 I
OB01G21470 Oryza brachyantha OB01G21470 I
OB01G43330 Oryza brachyantha OB01G43330 I
OBART01G11380 Oryza barthii OBART01G11380 I
OBART01G34430 Oryza barthii OBART01G34430 I
OBART02G07230 Oryza barthii OBART02G07230 I
OBART05G21230 Oryza barthii OBART05G21230 I
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I
OGLUM05G22440 Oryza glumaepatula OGLUM05G22440 I
OLONG_003165 Oryza longistaminata OLONG_003165 I
OLONG_010393 Oryza longistaminata OLONG_010393 I
OLONG_020675 Oryza longistaminata OLONG_020675 I
OMERI01G31730 Oryza meridionalis OMERI01G31730 I
OMERI02G08300 Oryza meridionalis OMERI02G08300 I
ONIVA01G13810 Oryza nivara ONIVA01G13810 I
ONIVA01G39320 Oryza nivara ONIVA01G39320 I
ONIVA02G08860 Oryza nivara ONIVA02G08860 I
ONIVA05G21900 Oryza nivara ONIVA05G21900 I
OPUNC01G11270 Oryza punctata OPUNC01G11270 I
OPUNC01G33450 Oryza punctata OPUNC01G33450 I
OPUNC02G06400 Oryza punctata OPUNC02G06400 I
OPUNC05G18920 Oryza punctata OPUNC05G18920 I
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I
ORUFI01G37800 Oryza rufipogon ORUFI01G37800 I
TGA2.3 Oryza sativa OS01G0279900 I
OS01G0808100 Oryza sativa OS01G0808100 I
OS02G0194900 Oryza sativa OS02G0194900 I
OS05G0492000 Oryza sativa OS05G0492000 I
Pavir.Ea03193 Panicum virgatum Pavir.Ea03193 I
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I
Pavir.J04905 Panicum virgatum Pavir.J04905 I
Pavir.J27823 Panicum virgatum Pavir.J27823 I
PDK_20s1462851g003 Phoenix dactylifera PDK_20s1462851g003 I
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I
PK07387.1 Cannabis sativa PK07387.1 I
PK08582.1 Cannabis sativa PK08582.1 I
PK09021.1 Cannabis sativa PK09021.1 D
PK13754.1 Cannabis sativa PK13754.1 I
PK21698.1 Cannabis sativa PK21698.1 I
Pm001317 Prunus mume Pm001317 I
Pm016643 Prunus mume Pm016643 I
Pm025995 Prunus mume Pm025995 I
Pm028917 Prunus mume Pm028917 I
Pm029028 Prunus mume Pm029028 I
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I
PAN Populus trichocarpa POPTR_0008s11710 I
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I
SapurV1A.0018s0400 Salix purpurea SapurV1A.0018s0400 I
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I
Sb03g006790 Sorghum bicolor Sb03g006790 I
Sb03g037560 Sorghum bicolor Sb03g037560 I
Sb04g006500 Sorghum bicolor Sb04g006500 I
Si001292m.g Setaria italica Si001292m.g I
Si002195m.g Setaria italica Si002195m.g I
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I
TCM_011845 Theobroma cacao TCM_011845 I
TCM_023491 Theobroma cacao TCM_023491 I
TCM_023492 Theobroma cacao TCM_023492 I
TCM_024862 Theobroma cacao TCM_024862 I
TCM_041421 Theobroma cacao TCM_041421 I
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I
TRAES3BF027700210CFD_g Triticum aestivum TRAES3BF027700210CFD_g I
Traes_3AL_5490CF370 Triticum aestivum Traes_3AL_5490CF370 I
Traes_3DL_A71427183 Triticum aestivum Traes_3DL_A71427183 I
Traes_7DS_E5A18AAA4 Triticum aestivum Traes_7DS_E5A18AAA4 I
TRIUR3_09546 Triticum urartu TRIUR3_09546 I
TRIUR3_33475 Triticum urartu TRIUR3_33475 I
PAN Vitis vinifera VIT_01s0011g03230 I
TGA9 Vitis vinifera VIT_06s0080g00360 I
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I
TGA10 Vitis vinifera VIT_08s0007g06160 I
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I
VIT_18s0001g04470 Vitis vinifera VIT_18s0001g04470 I