CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_07923
(
Coccidioides immitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
CIMG_07923
T357352_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01848
M01400_2.00
Aspergillus nidulans
NVGCGBBWVN
NBWVVCGCBN
PBM
Lambert et al.(2019)
pEX0279
0.610
0.789
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_07923T0
Zinc cluster
65
102
SGCFTCRLRRKKCDEGKPVCKACRNLKLKCEYKRPMWW
Links
Other
Zinc cluster
family TFs
Other
Coccidioides immitis
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_01659
Phytophthora parasitica
F443_01659
N
Physo129500
Phytophthora sojae
Physo129500
N
Physo134088
Phytophthora sojae
Physo134088
N
Physo134089
Phytophthora sojae
Physo134089
N
Physo145203
Phytophthora sojae
Physo145203
N
PITG_20148
Phytophthora infestans
PITG_20148
N