CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_12990
(
Stagonospora nodorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
SNOG_12990
T357872_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_12990
Zinc cluster
323
361
KACIRCREKKIKCNEGKPTCNQCKRGLWTCQYEVTGAKK
SNOT_12990
Zinc cluster
365
400
NGCINCKARKRKCTEERPSCAHCLRLDDDCEYVDYS
Links
Other
Zinc cluster
family TFs
Other
Stagonospora nodorum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035329
Oryza indica
BGIOSGA035329
N
OBART11G14720
Oryza barthii
OBART11G14720
N
OLONG_008726
Oryza longistaminata
OLONG_008726
N
OMERI11G12070
Oryza meridionalis
OMERI11G12070
N
ONIVA11G14140
Oryza nivara
ONIVA11G14140
N
OS11G0512200
Oryza sativa
OS11G0512200
N