CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01161
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_01161
T357939_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.540
0.457
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_01161T0
Zinc cluster
31
65
TGCLNCRRKKRKCDEAQPSCSGCARRREVCRWGLK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_04680
Beauveria bassiana
BBA_04680
N
0.555
BDDG_02031
Blastomyces dermatitidis
BDDG_02031
I
0.539
ANIA_06846
Aspergillus nidulans
CADANIAG00007644
D
0.540
CFIO01_03805
Colletotrichum fioriniae
CFIO01_03805
I
0.601
CGGC5_3013
Colletotrichum gloeosporioides
CGGC5_3013
I
0.601
CIMG_04661
Coccidioides immitis
CIMG_04661
I
0.539
Cob_02984
Colletotrichum orbiculare
Cob_02984
I
0.601
CSUB01_02738
Colletotrichum sublineola
CSUB01_02738
I
0.601
DEHA2B00638g
Debaryomyces hansenii
DEHA2B00638g
N
0.551
DOTSEDRAFT_71818
Dothistroma septosporum
DOTSEDRAFT_71818
N
0.564
estExt_Genewise1Plus.C_chr_50835
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_50835
N
0.593
EURHEDRAFT_528519
Aspergillus ruber
EURHEDRAFT_528519
I
0.539
F503_01249
Ophiostoma piceae uamh
F503_01249
I
0.618
FFUJ_09498
Fusarium fujikuroi
FFUJ_09498
N
0.558
FGRRES_16159
Fusarium graminearum
FGRRES_16159
N
0.566
FOXG_11581
Fusarium oxysporum
FOXG_11581
N
0.558
FPSE_05211
Fusarium pseudograminearum
FPSE_05211
N
0.566
FVEG_10243
Fusarium verticillioides
FVEG_10243
N
0.558
GLRG_09907
Colletotrichum graminicola
GLRG_09907
I
0.601
gw1.11.59.1
Mycosphaerella fijiensis
gw1.11.59.1
N
0.593
MAC_02441
Metarhizium acridum
MAC_02441
I
0.574
MAJ_10813
Metarhizium majus
MAJ_10813
I
0.588
MANI_013399
Metarhizium anisopliae
MANI_013399
N
0.570
MBR_05903
Metarhizium brunneum
MBR_05903
N
0.570
MGG_06778
Magnaporthe oryzae
MGG_06778
N
0.564
MGU_06573
Metarhizium guizhouense
MGU_06573
N
0.570
MYCFIDRAFT_142135
Pseudocercospora fijiensis
MYCFIDRAFT_142135
N
0.593
Mycgr3G72224
Zymoseptoria tritici
Mycgr3G72224
N
0.593
OIDMADRAFT_57009
Oidiodendron maius
OIDMADRAFT_57009
I
0.540
Pc12g14900
Penicillium chrysogenum
Pc12g14900
I
0.546
PCH_Pc12g14900
Penicillium rubens
PCH_Pc12g14900
I
0.546
PEX1_066340
Penicillium expansum
PEX1_066340
I
0.539
PITC_033600
Penicillium italicum
PITC_033600
I
0.539
PVAR5_5942
Byssochlamys spectabilis
PVAR5_5942
I
0.540
SEPMUDRAFT_157964
Sphaerulina musiva
SEPMUDRAFT_157964
N
0.593
SNOG_00909
Stagonospora nodorum
SNOG_00909
I
0.539
U727_00434270371
Penicillium solitum
U727_00434270371
I
0.539
VDAG_00765
Verticillium dahliae
VDAG_00765
I
0.658
VDBG_01161
Verticillium alfalfae
VDBG_01161
I
0.683
VHEMI02369
Torrubiella hemipterigena
VHEMI02369
N
0.577
X797_005648
Metarhizium robertsii
X797_005648
N
0.570