CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04567
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04567
T357996_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04567T0
Zinc cluster
27
65
RACDECRTRKLACSKEPDGCSRCRKEGITCVYSAQKPMG
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G21540
Brachypodium distachyon
BRADI4G21540
N
0.000
evm.TU.supercontig_10.263
Carica papaya
evm.TU.supercontig_10.263
N
0.000
GRMZM2G022365
Zea mays
GRMZM2G022365
N
0.000
GSMUA_Achr4G31340_001
Musa acuminata
GSMUA_Achr4G31340_001
N
0.000
Pavir.J20491
Panicum virgatum
Pavir.J20491
N
0.000
Traes_5AS_BABE20FBA
Triticum aestivum
Traes_5AS_BABE20FBA
N
0.000