VDBG_07828 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_07828 T358040_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FGRRES_04109
M02576_2.00 		Fusarium graminearum
NNNCGGNNNN
NNNNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8226 		0.683 1.000
NCU00445
M02586_2.00 		Neurospora crassa
NNCGGNNNNN
NNNNNCCGNN		 PBM
Weirauch et al.(2014)
pTH8914 		0.676 0.950
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_07828T0 Zinc cluster 57 102

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_10082 Exophiala aquamarina A1O9_10082 N
AB00088.1 Alternaria brassicicola AB00088.1 N
ACRE_028580 Acremonium chrysogenum ACRE_028580 N
CH063_03657 Colletotrichum higginsianum CH063_03657 N
CHGG_09798 Chaetomium globosum CHGG_09798 N
COCC4DRAFT_87358 Bipolaris maydis COCC4DRAFT_87358 N
COCCADRAFT_90976 Bipolaris zeicola COCCADRAFT_90976 N
COCMIDRAFT_81530 Bipolaris oryzae COCMIDRAFT_81530 N
COCSADRAFT_105936 Bipolaris sorokiniana COCSADRAFT_105936 N
COCVIDRAFT_32721 Bipolaris victoriae COCVIDRAFT_32721 N
CTHT_0017920 Chaetomium thermophilum CTHT_0017920 N
F503_03119 Ophiostoma piceae uamh F503_03119 N
FFUJ_01581 Fusarium fujikuroi FFUJ_01581 N
fgenesh1_pg.sca_8_chr1_1_0000412 Nectria haematococca fgenesh1_pg.sca_8_chr1_1_0000412 N
FGRRES_01378 Fusarium graminearum FGRRES_01378 N
FPSE_11552 Fusarium pseudograminearum FPSE_11552 N
gw1.2.32.1 Cochliobolus heterostrophus C5 gw1.2.32.1 N
HMPREF1624_07083 Sporothrix schenckii HMPREF1624_07083 N
MYCFIDRAFT_158158 Pseudocercospora fijiensis MYCFIDRAFT_158158 N
col-25 Neurospora crassa NCU06068 N
NechaG74381 Fusarium solani NechaG74381 N
OIDMADRAFT_74239 Oidiodendron maius OIDMADRAFT_74239 N
PODANS_5_4070 Podospora anserina PODANS_5_4070 N
PTRG_10286 Pyrenophora triticirepentis PTRG_10286 N
PTT_13765 Pyrenophora teres PTT_13765 N
PV09_00164 Verruconis gallopava PV09_00164 N
SETTUDRAFT_87447 Setosphaeria turcica SETTUDRAFT_87447 N
SMAC_07447 Sordaria macrospora SMAC_07447 N
SNOG_09876 Stagonospora nodorum SNOG_09876 N
SPBR_06366 Sporothrix brasiliensis SPBR_06366 N
VDAG_01189 Verticillium dahliae VDAG_01189 N
VDBG_03963 Verticillium alfalfae VDBG_03963 N
VDBG_03963 Verticillium albo atrum VDBG_03963 N