CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CCM_05172
(
Cordyceps militaris
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CCM_05172
T363006_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03417
M01422_2.00
Neurospora crassa
NNTCGGNNNH
DNNNCCGANN
PBM
Lambert et al.(2019)
pTH8926
0.551
0.757
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGX91015
Zinc cluster
33
71
LSCLECRRRKLSCDRGFPCERCIKSGTPDRCSYESRTGE
Links
Other
Zinc cluster
family TFs
Other
Cordyceps militaris
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRHL1
Homo sapiens
ENSG00000134317
D
0.000
GRHL1
Oryctolagus cuniculus
ENSOCUG00000017717
I
0.000
GRHL1
Pteropus vampyrus
ENSPVAG00000002002
I
0.000
Myotis_brandtii_GRHL1_10020834
Myotis brandtii
Myotis_brandtii_GRHL1_10020834
I
0.000
XP_002938936
Xenopus tropicalis
XP_002938936
I
0.000