CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CFIO01_00482
(
Colletotrichum fioriniae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CFIO01_00482
T363271_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-22
M01424_2.00
Neurospora crassa
NNNSBCCGGVVN
NBBCCGGVSNNN
PBM
Lambert et al.(2019)
pTH8929
0.638
0.897
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXF75997
Zinc cluster
34
72
TSCVLCQQRKVRCDKNKPCANCVKARVECRVIPPQPPRR
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum fioriniae
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.12239
Candida albicans
CaO19.12239
N
CaO19.12242
Candida albicans
CaO19.12242
N
CaO19.4776
Candida albicans
CaO19.4776
N
CaO19.4778
Candida albicans
CaO19.4778
N
CD36_08660
Candida dubliniensis
CD36_08660
N
CD36_08680
Candida dubliniensis
CD36_08680
N
CORT_0G01050
Candida orthopsilosis
CORT_0G01050
N
CORT_0G01060
Candida orthopsilosis
CORT_0G01060
N
CPAG_04296
Candida parapsilosis
CPAG_04296
N
CTRG_03265
Candida tropicalis
CTRG_03265
N