CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_11230
(
Colletotrichum higginsianum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CH063_11230
T363886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-21
M02600_2.00
Neurospora crassa
CGGMGWTA
TAWCKCCG
PBM
Weirauch et al.(2014)
pTH8945
0.562
0.784
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF40747
Zinc cluster
53
91
ISCTECHRRKQKCDRDLPCANCKSRNKQDACKYETGAPT
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum higginsianum
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_04511
Colletotrichum fioriniae
CFIO01_04511
I
0.683
CHGG_08197
Chaetomium globosum
CHGG_08197
I
0.594
Cob_03888
Colletotrichum orbiculare
Cob_03888
I
0.636
e_gw1.2.156.1
Cryphonectria parasitica
e_gw1.2.156.1
I
0.611
fgenesh1_pm.sca_3_chr4_2_0000157
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000157
I
0.594
FGRRES_05157
Fusarium graminearum
FGRRES_05157
I
0.636
FPSE_06556
Fusarium pseudograminearum
FPSE_06556
I
0.636
GLRG_08668
Colletotrichum graminicola
GLRG_08668
I
0.683
MAC_07236
Metarhizium acridum
MAC_07236
N
0.567
MANI_028761
Metarhizium anisopliae
MANI_028761
N
0.565
MBR_05091
Metarhizium brunneum
MBR_05091
N
0.565
MGU_01580
Metarhizium guizhouense
MGU_01580
N
0.565
MYCTH_2311492
Myceliophthora thermophila
MYCTH_2311492
I
0.641
col-21
Neurospora crassa
NCU03489
D
0.562
NechaG92542
Fusarium solani
NechaG92542
I
0.594
NEUTE1DRAFT_66044
Neurospora tetrasperma
NEUTE1DRAFT_66044
I
0.610
PODANS_6_4250
Podospora anserina
PODANS_6_4250
I
0.642
S40285_03084
Stachybotrys chlorohalonata
S40285_03084
N
0.584
S40288_01677
Stachybotrys chartarum
S40288_01677
N
0.584
SMAC_07224
Sordaria macrospora
SMAC_07224
I
0.610
TRIVIDRAFT_229893
Trichoderma virens
TRIVIDRAFT_229893
I
0.548
UCRPA7_8227
Togninia minima
UCRPA7_8227
I
0.612
VDAG_07012
Verticillium dahliae
VDAG_07012
I
0.664
VHEMI05522
Torrubiella hemipterigena
VHEMI05522
I
0.607
X797_008871
Metarhizium robertsii
X797_008871
N
0.565