CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CMQ_399
(
Grosmannia clavigera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CMQ_399
T364171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU10258
M02631_2.00
Neurospora crassa
NNHCGGVN
NBCCGDNN
PBM
Weirauch et al.(2014)
pTH8978
0.619
0.946
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX03471
Zinc cluster
14
53
GACVRCRKGKTKCVYENGRAPCRNCAKGMHECYLPSESMS
Links
Other
Zinc cluster
family TFs
Other
Grosmannia clavigera
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf185043.g34
Trametes cinnabarina
BN946_scf185043.g34
N
CERSUDRAFT_111060
Ceriporiopsis subvermispora
CERSUDRAFT_111060
N
fgenesh1_pg.C_scaffold_2000198
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000198
N
PHACADRAFT_114271
Phanerochaete carnosa
PHACADRAFT_114271
N
PHLGIDRAFT_89212
Phlebiopsis gigantea
PHLGIDRAFT_89212
N
POSPLDRAFT_94134
Postia placenta
POSPLDRAFT_94134
N