COCMIDRAFT_27930 (Bipolaris oryzae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCMIDRAFT_27930 T365005_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FGRRES_04109
M02576_2.00
Fusarium graminearum
NNNCGGNNNN

NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH8226
0.683 1.000
NCU00445
M02586_2.00
Neurospora crassa
NNCGGNNNNN

NNNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8914
0.676 0.950
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUC43598 Zinc cluster 26 71

Links

Other Zinc cluster family TFs
Other Bipolaris oryzae TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA037277 Oryza indica BGIOSGA037277 N
BGIOSGA037293 Oryza indica BGIOSGA037293 N
BGIOSGA037294 Oryza indica BGIOSGA037294 N
LPERR12G08400 Leersia perrieri LPERR12G08400 N
OB0134G10010 Oryza brachyantha OB0134G10010 N
OB0325G10010 Oryza brachyantha OB0325G10010 N
OB12G18970 Oryza brachyantha OB12G18970 N
OBART12G09720 Oryza barthii OBART12G09720 N
OBART12G09840 Oryza barthii OBART12G09840 N
OBART12G09870 Oryza barthii OBART12G09870 N
OGLUM12G11050 Oryza glumaepatula OGLUM12G11050 N
OGLUM12G11100 Oryza glumaepatula OGLUM12G11100 N
OLONG_012845 Oryza longistaminata OLONG_012845 N
OLONG_017316 Oryza longistaminata OLONG_017316 N
OMERI12G11070 Oryza meridionalis OMERI12G11070 N
ONIVA01G27180 Oryza nivara ONIVA01G27180 N
ONIVA08G15060 Oryza nivara ONIVA08G15060 N
ONIVA12G09980 Oryza nivara ONIVA12G09980 N
OPUNC01G25690 Oryza punctata OPUNC01G25690 N
OPUNC12G08740 Oryza punctata OPUNC12G08740 N
OPUNC12G08870 Oryza punctata OPUNC12G08870 N
ORGLA12G0092600 Oryza glaberrima ORGLA12G0092600 N
ORGLA12G0092700 Oryza glaberrima ORGLA12G0092700 N
ORUFI12G10750 Oryza rufipogon ORUFI12G10750 N
ORUFI12G10910 Oryza rufipogon ORUFI12G10910 N
ORUFI12G10940 Oryza rufipogon ORUFI12G10940 N