CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCMIDRAFT_27930
(
Bipolaris oryzae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
COCMIDRAFT_27930
T365005_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_04109
M02576_2.00
Fusarium graminearum
NNNCGGNNNN
NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH8226
0.683
1.000
NCU00445
M02586_2.00
Neurospora crassa
NNCGGNNNNN
NNNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8914
0.676
0.950
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC43598
Zinc cluster
26
71
QACIPCRRRKVRCDLGPVDNPHDPPCVRCRRESKECFFSATRRKRK
Links
Other
Zinc cluster
family TFs
Other
Bipolaris oryzae
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037277
Oryza indica
BGIOSGA037277
N
BGIOSGA037293
Oryza indica
BGIOSGA037293
N
BGIOSGA037294
Oryza indica
BGIOSGA037294
N
LPERR12G08400
Leersia perrieri
LPERR12G08400
N
OB0134G10010
Oryza brachyantha
OB0134G10010
N
OB0325G10010
Oryza brachyantha
OB0325G10010
N
OB12G18970
Oryza brachyantha
OB12G18970
N
OBART12G09720
Oryza barthii
OBART12G09720
N
OBART12G09840
Oryza barthii
OBART12G09840
N
OBART12G09870
Oryza barthii
OBART12G09870
N
OGLUM12G11050
Oryza glumaepatula
OGLUM12G11050
N
OGLUM12G11100
Oryza glumaepatula
OGLUM12G11100
N
OLONG_012845
Oryza longistaminata
OLONG_012845
N
OLONG_017316
Oryza longistaminata
OLONG_017316
N
OMERI12G11070
Oryza meridionalis
OMERI12G11070
N
ONIVA01G27180
Oryza nivara
ONIVA01G27180
N
ONIVA08G15060
Oryza nivara
ONIVA08G15060
N
ONIVA12G09980
Oryza nivara
ONIVA12G09980
N
OPUNC01G25690
Oryza punctata
OPUNC01G25690
N
OPUNC12G08740
Oryza punctata
OPUNC12G08740
N
OPUNC12G08870
Oryza punctata
OPUNC12G08870
N
ORGLA12G0092600
Oryza glaberrima
ORGLA12G0092600
N
ORGLA12G0092700
Oryza glaberrima
ORGLA12G0092700
N
ORUFI12G10750
Oryza rufipogon
ORUFI12G10750
N
ORUFI12G10910
Oryza rufipogon
ORUFI12G10910
N
ORUFI12G10940
Oryza rufipogon
ORUFI12G10940
N