M408DRAFT_332528 (Serendipita vermifera)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 M408DRAFT_332528 T372587_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_110010
M01418_2.00 		Schizophyllum commune
NWYCGGAABN
NVTTCCGRWN		 PBM
Lambert et al.(2019)
pTH9839 		0.595 0.794
aod-2
M02599_2.00 		Neurospora crassa
NNNNCGGRN
NYCCGNNNN		 PBM
Weirauch et al.(2014)
pTH8944 		0.568 0.706
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIM23048 Zinc cluster 86 121

Links

Other Zinc cluster family TFs
Other Serendipita vermifera TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_195.45 Carica papaya evm.TU.supercontig_195.45 N
GSMUA_Achr4G12180_001 Musa acuminata GSMUA_Achr4G12180_001 N
MTR_2g095050 Medicago truncatula MTR_2g095050 N
OB12G13660 Oryza brachyantha OB12G13660 N
OBART11G03800 Oryza barthii OBART11G03800 I
OLONG_016371 Oryza longistaminata OLONG_016371 I
PDK_20s1614221g001 Phoenix dactylifera PDK_20s1614221g001 I
PK17736.1 Cannabis sativa PK17736.1 N