CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDE_08558
(
Penicillium oxalicum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PDE_08558
T377525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.552
0.553
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPS33596
Zinc cluster
450
487
TGCLTCRKRRIKCDEGHPVCRNCVKSKRECLGYDPVFR
Links
Other
Zinc cluster
family TFs
Other
Penicillium oxalicum
TFs
267 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_14170
Hordeum vulgare
MLOC_14170
N
Traes_6AS_073DEE100
Triticum aestivum
Traes_6AS_073DEE100
N
Traes_6BS_46641470F
Triticum aestivum
Traes_6BS_46641470F
N
Traes_6DS_E67EB0CBE
Triticum aestivum
Traes_6DS_E67EB0CBE
N