CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SETTUDRAFT_38779
(
Setosphaeria turcica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SETTUDRAFT_38779
T383815_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.565
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOA88098
Zinc cluster
62
102
RACFACQRAHLTCGDERPCNRCIKRGLQDHCMDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Setosphaeria turcica
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG115154
Capitella teleta
CapteG115154
N
0.000
CGI_10022161
Crassostrea gigas
CGI_10022161
N
0.000
HelroG126586
Helobdella robusta
HelroG126586
N
0.000
LotgiG113393
Lottia gigantea
LotgiG113393
N
0.000
Ocbimv22000807m.g
Octopus bimaculoides
Ocbimv22000807m.g
N
0.000
SMU15030006
Schmidtea mediterranea
SMU15030006
N
0.000
SMU15031043
Schmidtea mediterranea
SMU15031043
N
0.000