SKUD_176303 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_176303 T383877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CHA4
M00095_2.00 		Saccharomyces cerevisiae
NRGCGGRGAN
NTCYCCGCYN		 PBM
Badis et al.(2008)
CHA4_2113 		0.650 0.897
CHA4
M01588_2.00 		Saccharomyces cerevisiae
NNCGGVNNN
NNNBCCGNN		 PBM
Zhu et al.(2009)
Cha4 		0.650 0.897
CHA4
M07521_2.00 		Saccharomyces cerevisiae
RGCGGRGW
WCYCCGCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0283.1 		0.650 0.897
CHA4
M08678_2.00 		Saccharomyces cerevisiae
VNNNVVGGCGGARWTNNHVNN
NNBDNNAWYTCCGCCBBNNNB		 Misc
DeBoer et al.(2011)
YLR098C_844 		0.650 0.897
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42657 Zinc cluster 44 82

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_144316 Bipolaris maydis COCC4DRAFT_144316 N
COCCADRAFT_6612 Bipolaris zeicola COCCADRAFT_6612 N
COCMIDRAFT_25193 Bipolaris oryzae COCMIDRAFT_25193 N
COCSADRAFT_248227 Bipolaris sorokiniana COCSADRAFT_248227 N
estExt_fgenesh1_pm.C_130086 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_130086 N
LEMA_P045200.1 Leptosphaeria maculans LEMA_P045200.1 N
MPH_01081 Macrophomina phaseolina MPH_01081 N
PTRG_04426 Pyrenophora triticirepentis PTRG_04426 N
PTT_10773 Pyrenophora teres PTT_10773 N
SETTUDRAFT_100153 Setosphaeria turcica SETTUDRAFT_100153 N
SNOG_05430 Stagonospora nodorum SNOG_05430 N
SNOG_05430 Phaeosphaeria nodorum SNOG_05430 N
UCRNP2_9742 Neofusicoccum parvum UCRNP2_9742 N