SKUD_200506 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_200506 T383892_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TEA1
M00107_2.00 		Saccharomyces cerevisiae
GCGGAVWTW
WAWBTCCGC		 PBM
Badis et al.(2008)
TEA1_2096 		0.683 1.000
TEA1
M01596_2.00 		Saccharomyces cerevisiae
BCGSNNNWNN
NNWNNNSCGV		 PBM
Zhu et al.(2009)
Tea1 		0.683 1.000
TEA1
M07534_2.00 		Saccharomyces cerevisiae
GCGSRCWH
DWGYSCGC		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0405.1 		0.683 1.000
TEA1
M08693_2.00 		Saccharomyces cerevisiae
DWNTKCGGDAWTTAAWHANC
GNTDWTTAAWTHCCGMANWH		 Misc
DeBoer et al.(2011)
YOR337W_817 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT44227 Zinc cluster 68 106

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

Invalid Input OrderBy

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action