CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UHOR_00180
(
Ustilago hordei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
UHOR_00180
T386636_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASG1
M00088_2.00
Saccharomyces cerevisiae
CGGRDNN
NNHYCCG
PBM
Badis et al.(2008)
ASG1_2140
0.549
0.600
ASG1
M01581_2.00
Saccharomyces cerevisiae
NCGGNDNN
NNHNCCGN
PBM
Zhu et al.(2009)
Asg1
0.549
0.600
ASG1
M07515_2.00
Saccharomyces cerevisiae
CCGGAW
WTCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1
0.549
0.600
ASG1
M08666_2.00
Saccharomyces cerevisiae
CCGGAW
WTCCGG
Misc
DeBoer et al.(2011)
YIL130W_529
0.549
0.600
ASG1
M08667_2.00
Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD
HCCGGVHKDKWBCCGG
Misc
DeBoer et al.(2011)
YIL130W_807
0.549
0.600
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF53828
Zinc cluster
82
124
RACDTCRKKKVRCDGLQPEKGACSNCANYGYECTFVDAARKRA
Links
Other
Zinc cluster
family TFs
Other
Ustilago hordei
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy