CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UM03525
(
Ustilago maydis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
UM03525
T386759_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03643
M01423_2.00
Neurospora crassa
NBYCGGBWNN
NNWVCCGRVN
PBM
Lambert et al.(2019)
pTH8861
0.538
0.450
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
UM03525P0
Zinc cluster
125
166
RACLECRLAKTKCNVTDSQDVCDRCAKFSFECRFVRHHRGRK
Links
Other
Zinc cluster
family TFs
Other
Ustilago maydis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1Plus.C_10802
Neurospora discreta
estExt_Genewise1Plus.C_10802
I
0.538
NCU03643
Neurospora crassa
NCU03643
D
0.538
NEUTE1DRAFT_120290
Neurospora tetrasperma
NEUTE1DRAFT_120290
I
0.538
PaG_03936
Pseudozyma aphidis
PaG_03936
N
0.617
PAN0_009c3772
Pseudozyma antarctica
PAN0_009c3772
N
0.617
PHSY_001337
Pseudozyma hubeiensis
PHSY_001337
N
0.646
PSEUBRA_SCAF10g05513
Pseudozyma brasiliensis
PSEUBRA_SCAF10g05513
N
0.637
SMAC_02522
Sordaria macrospora
SMAC_02522
I
0.538
sr14518
Sporisorium reilianum
sr14518
N
0.646
UHOR_05421
Ustilago hordei
UHOR_05421
N
0.617