CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDAG_08332
(
Verticillium dahliae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDAG_08332
T387404_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.683
0.973
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGY17998
Zinc cluster
569
608
RCQRCRKSKKGCDRQRPCGRCKDAGLSADQCISEDEGNGR
Links
Other
Zinc cluster
family TFs
Other
Verticillium dahliae
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.10169
Candida albicans
CaO19.10169
N
0.000
CaO19.2646
Candida albicans
CaO19.2646
N
0.000
CD36_53120
Candida dubliniensis
CD36_53120
N
0.000