CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_02139
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_02139
T387468_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY16030
Zinc cluster
19
62
VACTRCRKRKIRCSGDPGDGLPCHNCKNAGAEPCQFLRVASQET
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R002403
Calypte anna
Aan_R002403
N
Alligator_sinensis_CCG001820.1
Alligator sinensis
Alligator_sinensis_CCG001820.1
N
Cmyd_10005054
Chelonia mydas
Cmyd_10005054
N
ENSAMEG00000012036
Ailuropoda melanoleuca
ENSAMEG00000012036
N
ENSAMXG00000001813
Astyanax mexicanus
ENSAMXG00000001813
N
ENSAMXG00000014687
Astyanax mexicanus
ENSAMXG00000014687
N
ENSAPLG00000011761
Anas platyrhynchos
ENSAPLG00000011761
N
GATAD2B
Bos taurus
ENSBTAG00000006678
N
ENSBTAP00000008766-D1
Bos grunniens
ENSBTAP00000008766-D1
N
GATAD2B
Canis familiaris
ENSCAFG00000017433
N
GATAD2B
Choloepus hoffmanni
ENSCHOG00000013411
N
GATAD2B
Callithrix jacchus
ENSCJAG00000010131
N
GATAD2B
Cavia porcellus
ENSCPOG00000010326
N
ENSCSAG00000001881
Chlorocebus sabaeus
ENSCSAG00000001881
N
gatad2b
Danio rerio
ENSDARG00000005834
N
GATAD2B
Dasypus novemcinctus
ENSDNOG00000048326
N
Gatad2b
Dipodomys ordii
ENSDORG00000013431
N
GATAD2B
Equus caballus
ENSECAG00000011357
N
GATAD2B
Felis catus
ENSFCAG00000002751
N
GATAD2B
Homo sapiens
ENSG00000143614
N
gatad2b
Gasterosteus aculeatus
ENSGACG00000000510
N
ENSGALG00000029154
Gallus gallus
ENSGALG00000029154
N
GATAD2B
Gorilla gorilla
ENSGGOG00000012553
N
ENSGMOG00000013793
Gadus morhua
ENSGMOG00000013793
N
ENSLACG00000013888
Latimeria chalumnae
ENSLACG00000013888
N
GATAD2B
Loxodonta africana
ENSLAFG00000002667
N
ENSLOCG00000008705
Lepisosteus oculatus
ENSLOCG00000008705
N
ENSMEUG00000007551
Macropus eugenii
ENSMEUG00000007551
N
ENSMGAG00000017205
Meleagris gallopavo
ENSMGAG00000017205
N
GATAD2B
Microcebus murinus
ENSMICG00000008874
N
GATAD2B
Myotis lucifugus
ENSMLUG00000004859
N
GATAD2B
Macaca mulatta
ENSMMUG00000002696
N
GATAD2B
Monodelphis domestica
ENSMODG00000017336
N
ENSMPUG00000008136
Mustela putorius furo
ENSMPUG00000008136
N
Gatad2b
Mus musculus
ENSMUSG00000042390
N
ENSNLEG00000010649
Nomascus leucogenys
ENSNLEG00000010649
N
ENSOARG00000001486
Ovis aries
ENSOARG00000001486
N
GATAD2B
Oryctolagus cuniculus
ENSOCUG00000008135
N
GATAD2B
Otolemur garnettii
ENSOGAG00000004606
N
ENSONIG00000010369
Oreochromis niloticus
ENSONIG00000010369
N
GATAD2B
Ochotona princeps
ENSOPRG00000000027
N
gatad2b
Oryzias latipes
ENSORLG00000010868
N
ENSP00000357644
Macaca fascicularis
ENSP00000357644
N
ENSPANG00000008972
Papio anubis
ENSPANG00000008972
N
GATAD2B
Procavia capensis
ENSPCAG00000001797
N
ENSPFOG00000008182
Poecilia formosa
ENSPFOG00000008182
N
ENSPPYG00000029612
Pongo abelii
ENSPPYG00000029612
N
ENSPSIG00000004590
Pelodiscus sinensis
ENSPSIG00000004590
N
GATAD2B
Pan troglodytes
ENSPTRG00000001364
N
GATAD2B
Pteropus vampyrus
ENSPVAG00000011082
N
Gatad2b
Rattus norvegicus
ENSRNOG00000015553
N
GATAD2B
Sorex araneus
ENSSARG00000011365
N
ENSSHAG00000011064
Sarcophilus harrisii
ENSSHAG00000011064
N
GATAD2B
Sus scrofa
ENSSSCG00000006562
N
ENSSTOG00000005407
Ictidomys tridecemlineatus
ENSSTOG00000005407
N
GATAD2B
Tupaia belangeri
ENSTBEG00000015791
N
gatad2b
Tetraodon nigroviridis
ENSTNIG00000002290
N
gatad2b
Takifugu rubripes
ENSTRUG00000002877
N
ENSTSYG00000012560
Tarsius syrichta
ENSTSYG00000012560
N
GATAD2B
Tursiops truncatus
ENSTTRG00000014779
N
GATAD2B
Vicugna pacos
ENSVPAG00000010268
N
ENSXMAG00000010412
Xiphophorus maculatus
ENSXMAG00000010412
N
Gfo_R009850
Geospiza fortis
Gfo_R009850
N
Myotis_brandtii_GATAD2B_10031899
Myotis brandtii
Myotis_brandtii_GATAD2B_10031899
N
Ogr01497
Ophisaurus gracilis
Ogr01497
N
Pvit_02350
Pogona vitticeps
Pvit_02350
N
gatad2b
Xenopus tropicalis
XB-GENE-5995517
N