CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_chr_1.20163
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_chr_1.20163
T389621_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_1.20163
Zinc cluster
30
86
RACLSCREKKIKCDGEPISTIVSVDGSNKIIPQLTRICSNCKFLGIECVFVQSNRGG
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
PDK_20s1329542g002
Phoenix dactylifera
PDK_20s1329542g002
N
TCM_042705
Theobroma cacao
TCM_042705
N