CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_20_chr6_4_00446
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pm.C_sca_20_chr6_4_00446
T389681_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_20_chr6_4_00446
Zinc cluster
16
56
RSCWECRRRKIKCQFNSDEDAICVGCIQRETTCISQEYVQE
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADAORAG00005628
Aspergillus oryzae
CADAORAG00005628
N
ATEG_06857
Aspergillus terreus
CADATEAG00001669
N
fgenesh1_pm.00772_#_11
Aspergillus carbonarius
fgenesh1_pm.00772_#_11
N
PDE_04046
Penicillium oxalicum
PDE_04046
N
PEX1_005710
Penicillium expansum
PEX1_005710
N
PITC_042320
Penicillium italicum
PITC_042320
N
SEPMUDRAFT_163837
Sphaerulina musiva
SEPMUDRAFT_163837
I
U727_0043007021
Penicillium solitum
U727_0043007021
N