CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_32_chr11_3_0000153
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_32_chr11_3_0000153
T390223_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_32_chr11_3_0000153
Zinc cluster
19
58
TGCWTCRSRKVKCDEARPRCRHCLKKGIECEGYDIRLHWL
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_05586
Ancylostoma caninum
ANCCAN_05586
N
0.000
ANCCEY_05896
Ancylostoma ceylanicum
ANCCEY_05896
N
0.000
ASIM_0001807801
Anisakis simplex
ASIM_0001807801
N
0.000
CBG21083
Caenorhabditis briggsae
CBG21083
N
0.000
CBN08069
Caenorhabditis brenneri
CBN08069
N
0.000
CRE03332
Caenorhabditis remanei
CRE03332
N
0.000
HPLM_0000159901
Haemonchus placei
HPLM_0000159901
N
0.000
NBR_0001149301
Nippostrongylus brasiliensis
NBR_0001149301
N
0.000
OESDEN_10194
Oesophagostomum dentatum
OESDEN_10194
N
0.000
TELCIR_11807
Teladorsagia circumcincta
TELCIR_11807
N
0.000
npax-4
Caenorhabditis elegans
WBGene00007496
N
0.000