CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_44_chr3_2_0000044
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_44_chr3_2_0000044
T390249_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_44_chr3_2_0000044
Zinc cluster
23
62
TGCITCKIRKVKCDEAKPHCLRCIKTGRKCDGYRQTPNSS
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AUEXF2481DRAFT_530826
Aureobasidium subglaciale
AUEXF2481DRAFT_530826
N
0.549
CGGC5_13480
Colletotrichum gloeosporioides
CGGC5_13480
N
0.544
CH063_02132
Colletotrichum higginsianum
CH063_02132
N
0.569
Cob_02860
Colletotrichum orbiculare
Cob_02860
N
0.609
FFUJ_06535
Fusarium fujikuroi
FFUJ_06535
N
0.643
FGRRES_08135
Fusarium graminearum
FGRRES_08135
N
0.643
FOXG_02820
Fusarium oxysporum
FOXG_02820
N
0.643
FPSE_05458
Fusarium pseudograminearum
FPSE_05458
N
0.643
FVEG_01650
Fusarium verticillioides
FVEG_01650
N
0.643
M438DRAFT_276208
Aureobasidium pullulans
M438DRAFT_276208
N
0.550
NechaG77217
Fusarium solani
NechaG77217
N
0.683
S40288_01867
Stachybotrys chartarum
S40288_01867
N
0.546
SBOR_4351
Sclerotinia borealis
SBOR_4351
N
0.542
SEPMUDRAFT_57525
Sphaerulina musiva
SEPMUDRAFT_57525
N
0.565
Z517_03305
Fonsecaea pedrosoi
Z517_03305
N
0.565
Z518_06775
Rhinocladiella mackenziei
Z518_06775
N
0.565