CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_44_chr3_2_0000059
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_44_chr3_2_0000059
T390355_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_44_chr3_2_0000059
Zinc cluster
20
58
RDCRSCKSRGVKCDLNRPRCLPCVQSGLTCGGYPQRVVW
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_07258
Echinococcus canadensis
ECANG7_07258
N
EmuJ_001198700
Echinococcus multilocularis
EmuJ_001198700
N
HmN_000196100
Hymenolepis microstoma
HmN_000196100
N
L892_g14860
Steinernema scapterisci
L892_g14860
I
L893_g3995
Steinernema glaseri
L893_g3995
I
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
SSLN_0000732501
Schistocephalus solidus
SSLN_0000732501
N
SVE_0817200
Strongyloides venezuelensis
SVE_0817200
N
TsM_000521300
Taenia solium
TsM_000521300
N
TTAC_0000956901
Hydatigera taeniaeformis
TTAC_0000956901
N