CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ada-3
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU02896
T390581_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ada-3
M01421_2.00
Neurospora crassa
VCKCGCGA
TCGCGMGB
PBM
Lambert et al.(2019)
pTH8620
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01421_2.00
Zinc cluster
52
88
RSCVTCRRRKVRCDKHMPCSNCRRAQIPCIFPAPGRA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU02896
Zinc cluster
64
100
RSCVTCRRRKVRCDKHMPCSNCRRAQIPCIFPAPGRA
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_147461
Bipolaris maydis
COCC4DRAFT_147461
N
0.000
COCCADRAFT_8013
Bipolaris zeicola
COCCADRAFT_8013
N
0.000
COCMIDRAFT_102945
Bipolaris oryzae
COCMIDRAFT_102945
N
0.000
COCSADRAFT_263865
Bipolaris sorokiniana
COCSADRAFT_263865
N
0.000
COCVIDRAFT_18024
Bipolaris victoriae
COCVIDRAFT_18024
N
0.000
DOTSEDRAFT_70002
Dothistroma septosporum
DOTSEDRAFT_70002
N
0.000
estExt_Genewise1Plus.C_80653
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_80653
N
0.000
e_gw1.2.1212.1
Mycosphaerella graminicola
e_gw1.2.1212.1
N
0.000
gw1.14.53.1
Mycosphaerella fijiensis
gw1.14.53.1
N
0.000
LEMA_P087190.1
Leptosphaeria maculans
LEMA_P087190.1
N
0.000
MYCFIDRAFT_161751
Pseudocercospora fijiensis
MYCFIDRAFT_161751
N
0.000
Mycgr3G36903
Zymoseptoria tritici
Mycgr3G36903
N
0.000
PTT_10179
Pyrenophora teres
PTT_10179
N
0.000
S40285_05646
Stachybotrys chlorohalonata
S40285_05646
N
0.000
SEPMUDRAFT_38644
Sphaerulina musiva
SEPMUDRAFT_38644
N
0.000
SETTUDRAFT_138139
Setosphaeria turcica
SETTUDRAFT_138139
N
0.000
SNOG_02387
Stagonospora nodorum
SNOG_02387
N
0.000
UCRNP2_3637
Neofusicoccum parvum
UCRNP2_3637
N
0.000