CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU03110
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU03110
T390583_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03110
M02598_2.00
Neurospora crassa
NNNGCGGN
NCCGCNNN
PBM
Weirauch et al.(2014)
pTH9731
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02598_2.00
Zinc cluster
22
59
QACINCRKQKRRCDKSVPSCGLCARMNRQCDYSDSSSV
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU03110.1
Zinc cluster
22
59
QACINCRKQKRKCDKSVPSCGLCARMNRQCDYSDSSSV
NCU03110.2
Zinc cluster
22
59
QACINCRKQKRRCDKSVPSCGLCARMNRQCDYSDSSSV
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015146
Ailuropoda melanoleuca
ENSAMEG00000015146
N
ENSBTAG00000026286
Bos taurus
ENSBTAG00000026286
N
ENSBTAP00000012908-D1
Bos grunniens
ENSBTAP00000012908-D1
N
ENSCAFG00000011367
Canis familiaris
ENSCAFG00000011367
N
ENSCPOG00000022638
Cavia porcellus
ENSCPOG00000022638
N
ENSCSAG00000018260
Chlorocebus sabaeus
ENSCSAG00000018260
N
ENSDNOG00000043641
Dasypus novemcinctus
ENSDNOG00000043641
N
ENSECAG00000021592
Equus caballus
ENSECAG00000021592
N
GTF2IRD2B
Homo sapiens
ENSG00000174428
N
GTF2IRD2
Homo sapiens
ENSG00000196275
N
ENSLAFG00000013081
Loxodonta africana
ENSLAFG00000013081
N
ENSMLUG00000024497
Myotis lucifugus
ENSMLUG00000024497
N
ENSMMUG00000017270
Macaca mulatta
ENSMMUG00000017270
N
Gtf2ird2
Mus musculus
ENSMUSG00000015942
N
ENSOARG00000010976
Ovis aries
ENSOARG00000010976
N
ENSOCUG00000022131
Oryctolagus cuniculus
ENSOCUG00000022131
N
ENSOGAG00000000844
Otolemur garnettii
ENSOGAG00000000844
N
ENSP00000393677
Macaca fascicularis
ENSP00000393677
N
ENSPANG00000018076
Papio anubis
ENSPANG00000018076
N
ENSPPYG00000017480
Pongo abelii
ENSPPYG00000017480
N
ENSPTRG00000019295
Pan troglodytes
ENSPTRG00000019295
N
ENSPVAG00000005368
Pteropus vampyrus
ENSPVAG00000005368
N
ENSSSCG00000028635
Sus scrofa
ENSSSCG00000028635
N
Myotis_brandtii_GTF2IRD2_10014292
Myotis brandtii
Myotis_brandtii_GTF2IRD2_10014292
N
gtf2i
Xenopus tropicalis
XB-GENE-1217437
N