23380_YPR009W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23380_YPR009W T390831_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SUT2
M01600_2.00 		Saccharomyces cerevisiae
NNCGGASHNN
NNDSTCCGNN		 PBM
Zhu et al.(2009)
Sut2 		0.683 0.974
SUT2
M08699_2.00 		Saccharomyces cerevisiae
NNNNNYTCGGASTTYNDNND
HNNHNRAASTCCGARNNNNN		 Misc
DeBoer et al.(2011)
YPR009W_869 		0.683 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23380_YPR009W Zinc cluster 139 155
23380_YPR009W Zinc cluster 211 235

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22317_YPR009W Saccharomyces mikatae 22317_YPR009W I 0.683
25573_YPR009W Saccharomyces bayanus 25573_YPR009W I 0.593
AACERI_AaceriAEL298C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL298C I 0.557
AGOS_AEL298C Ashbya gossypii AGOS_AEL298C I 0.538
CORT_0E04710 Candida orthopsilosis CORT_0E04710 I 0.571
CPAG_00274 Candida parapsilosis CPAG_00274 I 0.552
Kpol_541p33 Vanderwaltozyma polyspora Kpol_541p33 I 0.565
TBLA_0F03550 Tetrapisispora blattae TBLA_0F03550 I 0.572
TPHA_0D00660 Tetrapisispora phaffii TPHA_0D00660 I 0.562
SUT2 Saccharomyces cerevisiae YPR009W D 0.683
ZYRO0F04928g Zygosaccharomyces rouxii ZYRO0F04928g I 0.551