4848_YBR240C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 4848_YBR240C T390856_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THI2
M08647_2.00 		Saccharomyces cerevisiae
NMNKNNNBNNBBNNNNCCGH
DCGGNNNNVVNNVNNNMNKN		 Misc
DeBoer et al.(2011)
YBR240C_1449 		0.683 1.000
THI2
M08467_2.00 		Saccharomyces cerevisiae
GGMAACYSWWAGARC
GYTCTWWSRGTTKCC		 COMPILED
Mathelier et al.(2014)
MA0407.1 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4848_YBR240C Zinc cluster 28 66

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007397 Calypte anna Aan_R007397 I
Afo_R006360 Aptenodytes forsteri Afo_R006360 I
Alligator_sinensis_CCG006744.1 Alligator sinensis Alligator_sinensis_CCG006744.1 I
Brh_R013202 Buceros rhinoceros Brh_R013202 I
LCORL Anolis carolinensis ENSACAG00000002012 I
ENSAMEG00000000192 Ailuropoda melanoleuca ENSAMEG00000000192 I
ENSAPLG00000006384 Anas platyrhynchos ENSAPLG00000006384 I
LCORL Bos taurus ENSBTAG00000046561 I
LCORL Canis familiaris ENSCAFG00000016672 I
LCORL Callithrix jacchus ENSCJAG00000012800 I
ENSCPOG00000003269 Cavia porcellus ENSCPOG00000003269 I
ENSCSAG00000016522 Chlorocebus sabaeus ENSCSAG00000016522 I
lcorl Danio rerio ENSDARG00000070098 I
LCORL Dasypus novemcinctus ENSDNOG00000001545 I
ENSDORG00000003797 Dipodomys ordii ENSDORG00000003797 I
LCORL Equus caballus ENSECAG00000000648 I
LCORL Erinaceus europaeus ENSEEUG00000000419 I
ENSFALG00000009227 Ficedula albicollis ENSFALG00000009227 I
LCORL Felis catus ENSFCAG00000029474 I
LCORL Homo sapiens ENSG00000178177 D
LCORL Gallus gallus ENSGALG00000014421 I
LCORL Gorilla gorilla ENSGGOG00000014894 I
ENSLACG00000017771 Latimeria chalumnae ENSLACG00000017771 I
LCORL Loxodonta africana ENSLAFG00000009691 I
LCORL Meleagris gallopavo ENSMGAG00000012554 I
ENSMICG00000008878 Microcebus murinus ENSMICG00000008878 I
LCORL Myotis lucifugus ENSMLUG00000013781 I
LCORL Monodelphis domestica ENSMODG00000000757 I
ENSMPUG00000002301 Mustela putorius furo ENSMPUG00000002301 I
Lcorl Mus musculus ENSMUSG00000015882 I
ENSNLEG00000016679 Nomascus leucogenys ENSNLEG00000016679 I
ENSOARG00000004333 Ovis aries ENSOARG00000004333 I
LCORL Oryctolagus cuniculus ENSOCUG00000006802 I
LCORL Otolemur garnettii ENSOGAG00000005593 I
ENSP00000371661 Macaca fascicularis ENSP00000371661 I
ENSP00000371661-D1 Bos grunniens ENSP00000371661-D1 I
ENSPANG00000024022 Papio anubis ENSPANG00000024022 I
LCORL Procavia capensis ENSPCAG00000007105 I
ENSPSIG00000017051 Pelodiscus sinensis ENSPSIG00000017051 I
LCORL Pan troglodytes ENSPTRG00000015943 I
ENSSHAG00000015746 Sarcophilus harrisii ENSSHAG00000015746 I
LCORL Sus scrofa ENSSSCG00000008748 I
ENSSTOG00000000960 Ictidomys tridecemlineatus ENSSTOG00000000960 I
LCORL Taeniopygia guttata ENSTGUG00000009625 I
ENSTSYG00000014055 Tarsius syrichta ENSTSYG00000014055 I
LCORL Tursiops truncatus ENSTTRG00000016951 I
LCORL Vicugna pacos ENSVPAG00000010356 I
Gfo_R010322 Geospiza fortis Gfo_R010322 I
Myotis_brandtii_LCORL_10024397 Myotis brandtii Myotis_brandtii_LCORL_10024397 I
Ogr00836 Ophisaurus gracilis Ogr00836 I
Pvit_18026 Pogona vitticeps Pvit_18026 I
Tal_R001804 Tyto alba Tal_R001804 I