CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_20430
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_20430
T391210_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_20430
Zinc cluster
89
128
HACVYCRRSHMTCDLERPCTRCIKRNIGHLCHDEPRDSDS
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G11510
Arabidopsis thaliana
AT1G11510
N
AT2G20613
Arabidopsis thaliana
AT2G20613
N
Bo4g143830
Brassica oleracea
Bo4g143830
N
Bo5g014840
Brassica oleracea
Bo5g014840
N
Bostr.5022s0146
Boechera stricta
Bostr.5022s0146
N
Bra019847
Brassica rapa
Bra019847
N
Cagra.0568s0056
Capsella grandiflora
Cagra.0568s0056
N
Cagra.20132s0006
Capsella grandiflora
Cagra.20132s0006
N
Carubv10011873m.g
Capsella rubella
Carubv10011873m.g
N
Carubv10015438m.g
Capsella rubella
Carubv10015438m.g
N
scaffold_101250.1
Arabidopsis lyrata
scaffold_101250.1
N
scaffold_304421.1
Arabidopsis lyrata
scaffold_304421.1
N