CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc20g15350
(
Penicillium chrysogenum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
Pc20g15350
T391814_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_02122
M01411_2.00
Aspergillus nidulans
NNCGGNNNN
NNNNCCGNN
PBM
Lambert et al.(2019)
pEX0305
0.618
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc20g15350.t1
Zinc cluster
21
60
RACDSCYKRKIKCDAALPQCNWCSHHNIPCTFDRVVQRKR
Links
Other
Zinc cluster
family TFs
Other
Penicillium chrysogenum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_082010
Aspergillus clavatus
CADACLAG00007864
I
0.640
AFUA_6G10010
Aspergillus fumigatus
CADAFUAG00002152
I
0.645
CADANGAG00008866
Aspergillus niger
CADANGAG00008866
I
0.592
ANIA_02122
Aspergillus nidulans
CADANIAG00010526
D
0.618
NFIA_055780
Neosartorya fischeri
CADNFIAG00005300
I
0.645
NFIA_072830
Neosartorya fischeri
CADNFIAG00008162
N
0.552
CHGG_03691
Chaetomium globosum
CHGG_03691
I
0.590
CLUG_04669
Candida lusitaniae
CLUG_04669
N
0.567
CLUG_04669
Clavispora lusitaniae
CLUG_04669
N
0.567
EURHEDRAFT_415786
Aspergillus ruber
EURHEDRAFT_415786
I
0.640
e_gw1.00118.151.1
Aspergillus carbonarius
e_gw1.00118.151.1
I
0.592
PCH_Pc20g15350
Penicillium rubens
PCH_Pc20g15350
I
0.683
PDE_03268
Penicillium oxalicum
PDE_03268
I
0.626
PFICI_08643
Pestalotiopsis fici
PFICI_08643
N
0.557