CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_073600
(
Penicillium marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
PMAA_073600
T392137_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01729
M01398_2.00
Aspergillus nidulans
NVCCGGNWN
NWNCCGGBN
PBM
Lambert et al.(2019)
pEX0275
0.593
0.757
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_073600.t1
Zinc cluster
29
65
RACDGCRRVKEKCEGGVPCRRCTRYHRQCIFNAPSEP
Links
Other
Zinc cluster
family TFs
Other
Penicillium marneffei
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_02754
Exophiala aquamarina
A1O9_02754
I
0.595
ACLA_083620
Aspergillus clavatus
CADACLAG00007771
I
0.571
CADAFLAG00009914
Aspergillus flavus
CADAFLAG00009914
I
0.571
AFUA_6G08790
Aspergillus fumigatus
CADAFUAG00001570
I
0.571
CADANGAG00008951
Aspergillus niger
CADANGAG00008951
I
0.569
ANIA_01729
Aspergillus nidulans
CADANIAG00008374
D
0.593
ATEG_06629
Aspergillus terreus
CADATEAG00009107
I
0.571
NFIA_054440
Neosartorya fischeri
CADNFIAG00005184
I
0.571
CCM_03452
Cordyceps militaris
CCM_03452
N
0.541
CH063_10516
Colletotrichum higginsianum
CH063_10516
I
0.561
EURHEDRAFT_377589
Aspergillus ruber
EURHEDRAFT_377589
I
0.617
FFUJ_03124
Fusarium fujikuroi
FFUJ_03124
I
0.556
fgenesh1_pg.sca_3_chr4_2_0000651
Nectria haematococca
fgenesh1_pg.sca_3_chr4_2_0000651
I
0.556
fgenesh1_pm.00118_#_285
Aspergillus carbonarius
fgenesh1_pm.00118_#_285
I
0.571
FGRRES_16711
Fusarium graminearum
FGRRES_16711
I
0.558
FOXG_02079
Fusarium oxysporum
FOXG_02079
I
0.556
FPSE_09096
Fusarium pseudograminearum
FPSE_09096
I
0.558
FVEG_05240
Fusarium verticillioides
FVEG_05240
I
0.556
NechaG79250
Fusarium solani
NechaG79250
I
0.556
OIDMADRAFT_106725
Oidiodendron maius
OIDMADRAFT_106725
I
0.601
Pc12g08840
Penicillium chrysogenum
Pc12g08840
I
0.569
PCH_Pc12g08840
Penicillium rubens
PCH_Pc12g08840
I
0.569
PDE_08811
Penicillium oxalicum
PDE_08811
I
0.569
PDIP_36160
Penicillium digitatum
PDIP_36160
I
0.569
PEX1_074170
Penicillium expansum
PEX1_074170
I
0.569
PITC_096370
Penicillium italicum
PITC_096370
I
0.569
PMAA_073600
Talaromyces marneffei
PMAA_073600
I
0.683
S40285_06305
Stachybotrys chlorohalonata
S40285_06305
I
0.545
S40288_04276
Stachybotrys chartarum
S40288_04276
I
0.545
SAPIO_CDS6292
Scedosporium apiospermum
SAPIO_CDS6292
N
0.551
TRIREDRAFT_60004
Trichoderma reesei
TRIREDRAFT_60004
N
0.581
TSTA_094060
Talaromyces stipitatus
TSTA_094060
I
0.682
U727_0043150051
Penicillium solitum
U727_0043150051
I
0.569