CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

AIL7 *(Arabidopsis lyrata)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	Al_scaffold_0008_3101	T000326_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AIL7 M06688_2.00	Arabidopsis thaliana	CRNWTHYCRAG	CTYGRDAWNYG	Dap-seq OMalley et al.(2016) AIL7_col_a	0.932	0.971
AIL7 M06689_2.00	Arabidopsis thaliana	DCRNWTHYCRAG	CTYGRDAWNYGH	Dap-seq OMalley et al.(2016) AIL7_colamp_a	0.932	0.971
PLT1 M06622_2.00	Arabidopsis thaliana	DDCACGNWWHYCRAGRHNN	NNDYCTYGRDWWNCGTGHH	Dap-seq OMalley et al.(2016) PLT1_col_a	0.860	0.886
PLT1 M06623_2.00	Arabidopsis thaliana	DYDCRNWTYYCRAG	CTYGRRAWNYGHRH	Dap-seq OMalley et al.(2016) PLT1_colamp_a	0.860	0.886
Q6SA75_TOBAC M09733_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ANTL_01	0.835	0.867
Q6SA75_TOBAC M09734_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ANTL_02	0.835	0.867
ANT M02647_2.00	Arabidopsis thaliana	DNRCACRNWTCCCVADGYNHW	WDNRCHTBGGGAWNYGTGYNH	SELEX Mathelier et al.(2014) MA0571.1	0.829	0.857
ANT M09705_2.00	Arabidopsis thaliana	CACRNWTCCCRAKG	CMTYGGGAWNYGTG	Transfac Matys et al.(2006) P$ANT_01	0.829	0.857
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Al_scaffold_0008_3101	AP2	176	236	SVYRGVTRHRWTGRYEAHLWDNSCRREGHARKGRQVYLGGYDKEDRAARAYDLAALKYWGP
Al_scaffold_0008_3101	AP2	278	330	SMYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGI

Links
Other AP2 family TFs
Other *Arabidopsis lyrata* TFs

594 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ATEG_04692	Aspergillus terreus	CADATEAG00010210	N	0.000
CERSUDRAFT_113664	Ceriporiopsis subvermispora	CERSUDRAFT_113664	N	0.000
MAJ_06074	Metarhizium majus	MAJ_06074	N	0.000
U727_00430770701	Penicillium solitum	U727_00430770701	N	0.000
UV8b_535	Ustilaginoidea virens	UV8b_535	N	0.000