CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ERF034 *(Arabidopsis thaliana)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	AT2G44940	T000463_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF034 M06614_2.00	Arabidopsis thaliana	NHNYCACCGACANHD	HDNTGTCGGTGRNDN	Dap-seq OMalley et al.(2016) At2g44940_col_a	(Direct)	(Direct)
ERF034 M06615_2.00	Arabidopsis thaliana	NDBCACCGACANH	DNTGTCGGTGVHN	Dap-seq OMalley et al.(2016) At2g44940_colamp_a	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF035 M06631_2.00	Arabidopsis thaliana	YCACCGACANWDNH	DNHWNTGTCGGTGR	Dap-seq OMalley et al.(2016) AT3G60490_col_a	0.800	0.940
ERF035 M06632_2.00	Arabidopsis thaliana	NNBCACCGACAHWNNN	NNNWDTGTCGGTGVNN	Dap-seq OMalley et al.(2016) AT3G60490_colamp_a	0.800	0.940
ERF043 M01627_2.00	Arabidopsis thaliana	YRCCGACA	TGTCGGYR	PBM Weirauch et al.(2014) pTH7413	0.788	0.900
ERF043 M06651_2.00	Arabidopsis thaliana	NNYCACCGACANHNNN	NNNDNTGTCGGTGRNN	Dap-seq OMalley et al.(2016) At4g32800_colamp_a	0.788	0.900
ERF043 M06652_2.00	Arabidopsis thaliana	NNYCACCGACANHNNH	DNNDNTGTCGGTGRNN	Dap-seq OMalley et al.(2016) At4g32800_col	0.788	0.900
Q8LKX0_MAIZE M09722_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DBF2_01	0.776	0.920
Q5MAR7_BRANA M09742_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII1_01	0.737	0.900
Q3HS44_BRANA M09741_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII2_01	0.737	0.900
Q3HS43_BRANA M09740_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII3_01	0.737	0.900
AT3G16280 M06618_2.00	Arabidopsis thaliana	NDNCACCGACANHN	NDNTGTCGGTGNHN	Dap-seq OMalley et al.(2016) AT3G16280_col_a	0.729	0.840
AT3G16280 M06619_2.00	Arabidopsis thaliana	BCACCGACAHWNNN	NNNWDTGTCGGTGV	Dap-seq OMalley et al.(2016) AT3G16280_colamp_a	0.729	0.840
ERF039 M01620_2.00	Arabidopsis thaliana	NNRCCGACDN	NHGTCGGYNN	PBM Weirauch et al.(2014) pTH8101	0.721	0.880
ERF039 M06635_2.00	Arabidopsis thaliana	HNNHDYCRCCGMCRN	NYGKCGGYGRHDNND	Dap-seq OMalley et al.(2016) At4g16750_col_a	0.721	0.880
ERF039 M06636_2.00	Arabidopsis thaliana	NNNNNNYCACCGACAHH	DDTGTCGGTGRNNNNNN	Dap-seq OMalley et al.(2016) At4g16750_colamp_a	0.721	0.880
ERF038 M06608_2.00	Arabidopsis thaliana	NHNHHDYCRCCGACA	TGTCGGYGRHDDNDN	Dap-seq OMalley et al.(2016) ERF38_col_a	0.721	0.860
ERF037 M00843_2.00	Arabidopsis thaliana	NRCCGACRN	NYGTCGGYN	PBM Franco-Zorrilla et al.(2014) At1g77200	0.716	0.880
ERF037 M06599_2.00	Arabidopsis thaliana	YCRCCGACAHHNNH	DNNDDTGTCGGYGR	Dap-seq OMalley et al.(2016) AT1G77200_col_a	0.716	0.880
ERF037 M06600_2.00	Arabidopsis thaliana	NNYACCGACAHN	NDTGTCGGTRNN	Dap-seq OMalley et al.(2016) AT1G77200_colamp_a	0.716	0.880
TINY M01094_2.00	Arabidopsis thaliana	NHRCCGACAN	NTGTCGGYDN	PBM Lambert et al.(2019) pTH11541	0.696	0.860
TINY M06669_2.00	Arabidopsis thaliana	HNYCRCCGACANHDN	NHDNTGTCGGYGRND	Dap-seq OMalley et al.(2016) TINY_col_a	0.696	0.860
Q3HS42_BRANA M09739_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII4_01	0.694	0.880
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AT2G44940.1	AP2	98	149	PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGT

Links
Other AP2 family TFs
Other *Arabidopsis thaliana* TFs

461 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
OLONG_013234	Oryza longistaminata	OLONG_013234	N
Pavir.J16240	Panicum virgatum	Pavir.J16240	N
Pavir.Ia00281	Panicum virgatum	Pavir.Ia00281	N
Traes_5BL_DF8EC4A24	Triticum aestivum	Traes_5BL_DF8EC4A24	N
Si034627m.g	Setaria italica	Si034627m.g	N
OS04G0590400	Oryza sativa	OS04G0590400	N
ORUFI04G25140	Oryza rufipogon	ORUFI04G25140	N
ORGLA04G0200000	Oryza glaberrima	ORGLA04G0200000	N
OPUNC04G20980	Oryza punctata	OPUNC04G20980	N
ONIVA04G22790	Oryza nivara	ONIVA04G22790	N
BGIOSGA017023	Oryza indica	BGIOSGA017023	N
OGLUM04G23390	Oryza glumaepatula	OGLUM04G23390	N
OBART04G23460	Oryza barthii	OBART04G23460	N
OB04G30360	Oryza brachyantha	OB04G30360	N
MLOC_2933	Hordeum vulgare	MLOC_2933	N
LPERR04G19190	Leersia perrieri	LPERR04G19190	N
GRMZM2G368909	Zea mays	GRMZM2G368909	N
F775_04155	Aegilops tauschii	F775_04155	N
BRADI1G03620	Brachypodium distachyon	BRADI1G03620	N

ERF034 (Arabidopsis thaliana) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

461 Related TFs

ERF034 **(Arabidopsis thaliana)
AP2**