Bo1g102220 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo1g102220 T000727_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.785 0.959
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.752 0.776
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.752 0.776
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.752 0.776
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.714 0.694
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.690 0.735
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.690 0.735
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.682 0.673
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.682 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g102220.1 AP2 18 70

Links

Other AP2 family TFs
Other Brassica oleracea TFs

347 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSNLEG00000005096 Nomascus leucogenys ENSNLEG00000005096 N
XP_002935327 Xenopus tropicalis XP_002935327 N
Tal_R011854 Tyto alba Tal_R011854 N
Myotis_brandtii_NFX1_10010343 Myotis brandtii Myotis_brandtii_NFX1_10010343 N
ENSP00000368856 Macaca fascicularis ENSP00000368856 N
ENSP00000368856-D1 Bos grunniens ENSP00000368856-D1 N
ENSSHAG00000010272 Sarcophilus harrisii ENSSHAG00000010272 N
Nfx1 Rattus norvegicus ENSRNOG00000009015 N
NFX1 Pteropus vampyrus ENSPVAG00000011479 N
NFX1 Pan troglodytes ENSPTRG00000020858 N
ENSPPYG00000019136 Pongo abelii ENSPPYG00000019136 N
ENSPANG00000025304 Papio anubis ENSPANG00000025304 N
NFX1 Otolemur garnettii ENSOGAG00000000775 N
NFX1 Oryctolagus cuniculus ENSOCUG00000008957 N
ENSOARG00000009478 Ovis aries ENSOARG00000009478 N
ENSAMEG00000007472 Ailuropoda melanoleuca ENSAMEG00000007472 N
Nfx1 Mus musculus ENSMUSG00000028423 N
ENSMPUG00000004111 Mustela putorius furo ENSMPUG00000004111 N
NFX1 Monodelphis domestica ENSMODG00000003990 N
NFX1 Myotis lucifugus ENSMLUG00000011069 N
ENSLACG00000000769 Latimeria chalumnae ENSLACG00000000769 N
NFX1 Gorilla gorilla ENSGGOG00000006751 N
NFX1 Homo sapiens ENSG00000086102 N
ENSFCAG00000007905 Felis catus ENSFCAG00000007905 N
NFX1 Dasypus novemcinctus ENSDNOG00000002079 N
ENSCSAG00000009971 Chlorocebus sabaeus ENSCSAG00000009971 N
NFX1 Cavia porcellus ENSCPOG00000003470 N
NFX1 Choloepus hoffmanni ENSCHOG00000009225 N
NFX1 Canis familiaris ENSCAFG00000001848 N
NFX1 Bos taurus ENSBTAG00000012385 N