CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bo9g177130 *(Brassica oleracea)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	Bo9g177130	T000980_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK07402.1 M01097_2.00	Cannabis sativa	NVRCCGMCH	DGKCGGYBN	PBM Lambert et al.(2019) pTH11436	0.714	0.857
Q8H769_WHEAT M09721_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREB1_01	0.684	0.796
DREB2A M06655_2.00	Arabidopsis thaliana	NNNNHDHMACCGMCWYHNNNN	NNNNDRWGKCGGTKDHDNNNN	Dap-seq OMalley et al.(2016) DREB2_col_a	0.680	0.918
DREB2A M06656_2.00	Arabidopsis thaliana	NHNHMACCGMCWTWD	HWAWGKCGGTKDNDN	Dap-seq OMalley et al.(2016) DREB2_colamp_a	0.680	0.918
Q84ND8_HORVU M09719_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DRF11_01	0.680	0.878
Q84JE9_HORVU M09718_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DRF13_01	0.680	0.878
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bo9g177130.1	AP2	77	128	CSFRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAEKAAAAYDEAAKAMYGP

Links
Other AP2 family TFs
Other *Brassica oleracea* TFs