Bra016133 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra016133 T001096_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.806 0.900
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.806 0.900
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.806 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra016133.1-P AP2 12 63

Links

Other AP2 family TFs
Other Brassica rapa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G26100 Brachypodium distachyon BRADI5G26100 N 0.000
F775_24378 Aegilops tauschii F775_24378 N 0.000
MLOC_50915 Hordeum vulgare MLOC_50915 N 0.000
OPUNC04G27120 Oryza punctata OPUNC04G27120 N 0.000
ORGLA03G0402000 Oryza glaberrima ORGLA03G0402000 N 0.000