Bra018271 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra018271 T001115_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF15
M00718_2.00 		Arabidopsis thaliana
NGSCGSCB
VGSCGSCN		 PBM
Chang et al.(2013)
pTH7336 		0.809 0.918
ERF15
M06604_2.00 		Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY
RHGGCGGCKVHDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF15_colamp_a 		0.809 0.918
ERF15
M06605_2.00 		Arabidopsis thaliana
NNYHDYMGCCGCCRY
RYGGCGGCKRHDRNN		 Dap-seq
OMalley et al.(2016)
ERF15_col 		0.809 0.918
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.745 0.837
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.745 0.837
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.745 0.837
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.745 0.837
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.745 0.837
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.717 0.796
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.705 0.776
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.697 0.857
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.694 0.714
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.690 0.755
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.690 0.755
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.690 0.755
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.687 0.837
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.686 0.735
0100010458
M01644_2.00 		Ostreococcus tauri
MGCCGSCR
YGSCGGCK		 PBM
Weirauch et al.(2014)
pTH9447 		0.682 0.735
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.681 0.714
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.681 0.714
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.681 0.714
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.679 0.673
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.679 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018271.1-P AP2 78 130

Links

Other AP2 family TFs
Other Brassica rapa TFs

525 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ada-3 Neurospora crassa NCU02896 D
SNOG_00466 Stagonospora nodorum SNOG_00466 I
VDBG_09581 Verticillium albo atrum VDBG_09581 I
A1O1_06649 Capronia coronata A1O1_06649 I
A1O3_10484 Capronia epimyces A1O3_10484 I
A1O5_10159 Cladophialophora psammophila A1O5_10159 I
A1O7_01941 Cladophialophora yegresii A1O7_01941 I
ACRE_020490 Acremonium chrysogenum ACRE_020490 I
ACRE_030130 Acremonium chrysogenum ACRE_030130 I
AUEXF2481DRAFT_27177 Aureobasidium subglaciale AUEXF2481DRAFT_27177 I
BAUCODRAFT_63686 Baudoinia compniacensis BAUCODRAFT_63686 I
BBA_01669 Beauveria bassiana BBA_01669 I
Bcin05g02960 Botrytis cinerea Bcin05g02960 I
Bcin16g00320 Botrytis cinerea Bcin16g00320 I
ANIA_10504 Aspergillus nidulans CADANIAG00004652 I
ATEG_03831 Aspergillus terreus CADATEAG00008906 I
CCM_09011 Cordyceps militaris CCM_09011 I
CFIO01_06708 Colletotrichum fioriniae CFIO01_06708 I
CH063_12126 Colletotrichum higginsianum CH063_12126 I
CHGG_02020 Chaetomium globosum CHGG_02020 I
CMQ_5979 Grosmannia clavigera CMQ_5979 I
Cob_07183 Colletotrichum orbiculare Cob_07183 I
CPUR_05074 Claviceps purpurea CPUR_05074 I
CSUB01_10649 Colletotrichum sublineola CSUB01_10649 I
DOTSEDRAFT_127076 Dothistroma septosporum DOTSEDRAFT_127076 I
F503_08863 Ophiostoma piceae uamh F503_08863 I
FFUJ_00433 Fusarium fujikuroi FFUJ_00433 I
FFUJ_04592 Fusarium fujikuroi FFUJ_04592 I
FGRRES_00800 Fusarium graminearum FGRRES_00800 I
FGRRES_16250 Fusarium graminearum FGRRES_16250 I
FGRRES_17664 Fusarium graminearum FGRRES_17664 I
FOXG_01137 Fusarium oxysporum FOXG_01137 I
FPSE_09263 Fusarium pseudograminearum FPSE_09263 I
FPSE_12020 Fusarium pseudograminearum FPSE_12020 I
FPSE_12440 Fusarium pseudograminearum FPSE_12440 I
FVEG_00379 Fusarium verticillioides FVEG_00379 I
G647_09757 Cladophialophora carrionii G647_09757 I
GGTG_03334 Gaeumannomyces graminis GGTG_03334 I
GLRG_00909 Colletotrichum graminicola GLRG_00909 I
HMPREF1120_04361 Exophiala dermatitidis HMPREF1120_04361 I
HMPREF1541_07144 Cyphellophora europaea HMPREF1541_07144 I
HMPREF1624_06736 Sporothrix schenckii HMPREF1624_06736 I
HMPREF1624_08785 Sporothrix schenckii HMPREF1624_08785 I
M437DRAFT_65869 Aureobasidium melanogenum M437DRAFT_65869 I
M438DRAFT_32848 Aureobasidium pullulans M438DRAFT_32848 I
MAC_05495 Metarhizium acridum MAC_05495 I
MAJ_05922 Metarhizium majus MAJ_05922 I
MAM_07411 Metarhizium album MAM_07411 I
MANI_000308 Metarhizium anisopliae MANI_000308 I
MAPG_01446 Magnaporthe poae MAPG_01446 I
MBR_00159 Metarhizium brunneum MBR_00159 I
MGU_09666 Metarhizium guizhouense MGU_09666 I
MPH_09781 Macrophomina phaseolina MPH_09781 I
MYCFIDRAFT_36148 Pseudocercospora fijiensis MYCFIDRAFT_36148 I
Mycgr3G33662 Zymoseptoria tritici Mycgr3G33662 I
MYCTH_2307957 Myceliophthora thermophila MYCTH_2307957 I
NechaG11213 Fusarium solani NechaG11213 I
NechaG65901 Fusarium solani NechaG65901 I
NechaG88015 Fusarium solani NechaG88015 I
NechaG91416 Fusarium solani NechaG91416 I
NEUTE1DRAFT_92483 Neurospora tetrasperma NEUTE1DRAFT_92483 I
PFICI_03077 Pestalotiopsis fici PFICI_03077 I
PITC_068620 Penicillium italicum PITC_068620 I
PODANS_1_1340 Podospora anserina PODANS_1_1340 I
PTRG_10316 Pyrenophora triticirepentis PTRG_10316 I
PTT_13784 Pyrenophora teres PTT_13784 I
PV04_02129 Capronia semiimmersa PV04_02129 I
PV05_07659 Exophiala xenobiotica PV05_07659 I
PV05_10700 Exophiala xenobiotica PV05_10700 I
PV06_07997 Exophiala oligosperma PV06_07997 I
PV07_02419 Cladophialophora immunda PV07_02419 I
PV09_00486 Verruconis gallopava PV09_00486 I
PV11_03531 Exophiala sideris PV11_03531 I
S40285_01095 Stachybotrys chlorohalonata S40285_01095 I
S40288_07746 Stachybotrys chartarum S40288_07746 I
SAPIO_CDS1279 Scedosporium apiospermum SAPIO_CDS1279 I
SBOR_5952 Sclerotinia borealis SBOR_5952 I
SEPMUDRAFT_148059 Sphaerulina musiva SEPMUDRAFT_148059 I
SETTUDRAFT_19016 Setosphaeria turcica SETTUDRAFT_19016 I
SMAC_00550 Sordaria macrospora SMAC_00550 I
SNOG_00466 Phaeosphaeria nodorum SNOG_00466 I
SPBR_02264 Sporothrix brasiliensis SPBR_02264 I
SPBR_06491 Sporothrix brasiliensis SPBR_06491 I
SS1G_02138 Sclerotinia sclerotiorum SS1G_02138 I
THITE_123221 Thielavia terrestris THITE_123221 I
TRIATDRAFT_172200 Trichoderma atroviride TRIATDRAFT_172200 I
TRIREDRAFT_62297 Trichoderma reesei TRIREDRAFT_62297 I
TRIVIDRAFT_113147 Trichoderma virens TRIVIDRAFT_113147 I
UCREL1_10592 Eutypa lata UCREL1_10592 I
UCREL1_7993 Eutypa lata UCREL1_7993 I
UCRNP2_6697 Neofusicoccum parvum UCRNP2_6697 I
UCRPA7_8612 Togninia minima UCRPA7_8612 I
UV8b_5957 Ustilaginoidea virens UV8b_5957 I
VDAG_04814 Verticillium dahliae VDAG_04814 I
VDAG_06235 Verticillium dahliae VDAG_06235 I
VDBG_09581 Verticillium alfalfae VDBG_09581 I
VHEMI05094 Torrubiella hemipterigena VHEMI05094 I
X797_002513 Metarhizium robertsii X797_002513 I
Z517_00016 Fonsecaea pedrosoi Z517_00016 I
Z518_05417 Rhinocladiella mackenziei Z518_05417 I
Z519_12694 Cladophialophora bantiana Z519_12694 I
e_gw1.1.2059.1 Mycosphaerella graminicola e_gw1.1.2059.1 I
e_gw1.9.518.1 Mycosphaerella fijiensis e_gw1.9.518.1 I
estExt_Genewise1Plus.C_270154 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_270154 I
estExt_Genewise1Plus.C_40406 Neurospora discreta estExt_Genewise1Plus.C_40406 I
estExt_Genewise1Plus.C_sca_1_chr1_3_01292 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_01292 I
fgenesh1_pg.sca_76_chr13_2_0000013 Nectria haematococca fgenesh1_pg.sca_76_chr13_2_0000013 I
fgenesh1_pm.sca_26_chr2_2_0000019 Nectria haematococca fgenesh1_pm.sca_26_chr2_2_0000019 I
gw1.18.787.1 Nectria haematococca gw1.18.787.1 I
AB00861.1 Alternaria brassicicola AB00861.1 I
estExt_Genewise1Plus.C_41920 Cryphonectria parasitica estExt_Genewise1Plus.C_41920 I