Bra030255 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra030255 T001202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.750 0.833
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.750 0.833
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.740 0.812
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra030255.1-P AP2 52 103

Links

Other AP2 family TFs
Other Brassica rapa TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MGYG_06020 Microsporum gypseum MGYG_06020 N 0.000
PV08_04239 Exophiala spinifera PV08_04239 N 0.000
PV07_03969 Cladophialophora immunda PV07_03969 N 0.000
PV06_00365 Exophiala oligosperma PV06_00365 N 0.000
PV05_05003 Exophiala xenobiotica PV05_05003 N 0.000
PV04_06122 Capronia semiimmersa PV04_06122 N 0.000
PODANS_2_2600 Podospora anserina PODANS_2_2600 N 0.000
OIDMADRAFT_141697 Oidiodendron maius OIDMADRAFT_141697 N 0.000
OCS_04024 Ophiocordyceps sinensis OCS_04024 N 0.000
NechaG50578 Fusarium solani NechaG50578 N 0.000
SBOR_10075 Sclerotinia borealis SBOR_10075 N 0.000
MGU_03784 Metarhizium guizhouense MGU_03784 N 0.000
MCYG_05945 Arthroderma otae MCYG_05945 N 0.000
MBR_07492 Metarhizium brunneum MBR_07492 N 0.000
MBM_01244 Marssonina brunnea MBM_01244 N 0.000
MAPG_03921 Magnaporthe poae MAPG_03921 N 0.000
MANI_018332 Metarhizium anisopliae MANI_018332 N 0.000
MAJ_03662 Metarhizium majus MAJ_03662 N 0.000
MAC_06449 Metarhizium acridum MAC_06449 N 0.000
VDAG_04562 Verticillium dahliae VDAG_04562 N 0.000
e_gw1.14.618.1 Nectria haematococca e_gw1.14.618.1 N 0.000
Z519_04250 Cladophialophora bantiana Z519_04250 N 0.000
Z518_09578 Rhinocladiella mackenziei Z518_09578 N 0.000
Z517_00692 Fonsecaea pedrosoi Z517_00692 N 0.000
X797_003404 Metarhizium robertsii X797_003404 N 0.000
VHEMI10725 Torrubiella hemipterigena VHEMI10725 N 0.000
VHEMI10091 Torrubiella hemipterigena VHEMI10091 N 0.000
VDBG_09326 Verticillium alfalfae VDBG_09326 N 0.000
HMPREF1541_08408 Cyphellophora europaea HMPREF1541_08408 N 0.000
V499_07080 Pseudogymnoascus pannorum V499_07080 N 0.000
UV8b_1370 Ustilaginoidea virens UV8b_1370 N 0.000
UREG_06714 Uncinocarpus reesii UREG_06714 N 0.000
TRV_02801 Trichophyton verrucosum TRV_02801 N 0.000
TESG_07658 Trichophyton tonsurans TESG_07658 N 0.000
TEQG_04364 Trichophyton equinum TEQG_04364 N 0.000
SS1G_12488 Sclerotinia sclerotiorum SS1G_12488 N 0.000
SNOG_13398 Phaeosphaeria nodorum SNOG_13398 N 0.000
ARB_04542 Arthroderma benhamiae ARB_04542 N 0.000
CPC735_070400 Coccidioides posadasii CPC735_070400 N 0.000
Cob_01758 Colletotrichum orbiculare Cob_01758 N 0.000
CH063_12954 Colletotrichum higginsianum CH063_12954 N 0.000
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N 0.000
CFIO01_13194 Colletotrichum fioriniae CFIO01_13194 N 0.000
BGHDH14_bgh02243 Blumeria graminis BGHDH14_bgh02243 N 0.000
Bcin10g04400 Botrytis cinerea Bcin10g04400 N 0.000
BBA_07259 Beauveria bassiana BBA_07259 N 0.000
CSUB01_05390 Colletotrichum sublineola CSUB01_05390 N 0.000
A1O9_04250 Exophiala aquamarina A1O9_04250 N 0.000
A1O7_05748 Cladophialophora yegresii A1O7_05748 N 0.000
A1O5_10088 Cladophialophora psammophila A1O5_10088 N 0.000
A1O3_01321 Capronia epimyces A1O3_01321 N 0.000
A1O1_04095 Capronia coronata A1O1_04095 N 0.000
VDBG_09326 Verticillium albo atrum VDBG_09326 N 0.000
SNOG_13398 Stagonospora nodorum SNOG_13398 N 0.000
MCYG_05945 Microsporum canis MCYG_05945 N 0.000
GGTG_14195 Gaeumannomyces graminis GGTG_14195 N 0.000
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N 0.000
H105_02417 Trichophyton soudanense H105_02417 N 0.000
H102_02396 Trichophyton rubrum H102_02396 N 0.000
H101_07912 Trichophyton interdigitale H101_07912 N 0.000
GSTUM_00009849001 Tuber melanosporum GSTUM_00009849001 N 0.000
GMDG_03182 Pseudogymnoascus destructans GMDG_03182 N 0.000
GMDG_02112 Pseudogymnoascus destructans GMDG_02112 N 0.000
GLRG_01306 Colletotrichum graminicola GLRG_01306 N 0.000
CIMG_04804 Coccidioides immitis CIMG_04804 N 0.000
G647_06777 Cladophialophora carrionii G647_06777 N 0.000
FVEG_07339 Fusarium verticillioides FVEG_07339 N 0.000
FPSE_09133 Fusarium pseudograminearum FPSE_09133 N 0.000
FOXG_14431 Fusarium oxysporum FOXG_14431 N 0.000
FOXG_04220 Fusarium oxysporum FOXG_04220 N 0.000
FGRRES_01915 Fusarium graminearum FGRRES_01915 N 0.000
FFUJ_12231 Fusarium fujikuroi FFUJ_12231 N 0.000
EV44_g2178 Erysiphe necator EV44_g2178 N 0.000