fgenesh2_kg.2__1411__AT1G71520.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.2__1411__AT1G71520.1 T001655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.818 0.939
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.818 0.939
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.818 0.939
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1411__AT1G71520.1 AP2 11 61

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm8894 Brugia malayi Bm8894 N
WBGene00240585 Onchocerca volvulus WBGene00240585 N
BTMF_0001802901 Brugia timori BTMF_0001802901 N
nAv.1.0.1.g03365 Acanthocheilonema viteae nAv.1.0.1.g03365 N
nLs.2.1.2.g06304 Litomosoides sigmodontis nLs.2.1.2.g06304 N
nOo.2.0.1.g02859 Onchocerca ochengi nOo.2.0.1.g02859 N
OFLC_0001600901 Onchocerca flexuosa OFLC_0001600901 N
TCLT_0000641701 Thelazia callipaeda TCLT_0000641701 N