CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G021369
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G021369
T002089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.732
0.843
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.718
0.804
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.699
0.804
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G021369_P01
AP2
30
81
RQYKGVRMRSWGSWVSEVRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGS
GRMZM2G021369_P02
AP2
30
81
RQYKGVRMRSWGSWVSEVRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGS
GRMZM2G021369_P03
AP2
30
81
RQYKGVRMRSWGSWVSEVRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGS
Links
Other
AP2
family TFs
Other
Zea mays
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_18992
Ancylostoma caninum
ANCCAN_18992
N
SBAD_0000588701
Soboliphyme baturini
SBAD_0000588701
N
OESDEN_18584
Oesophagostomum dentatum
OESDEN_18584
N
nDi.2.2.2.g12762
Dirofilaria immitis
nDi.2.2.2.g12762
N
L892_g9684
Steinernema scapterisci
L892_g9684
N
EEL_0001063101
Elaeophora elaphi
EEL_0001063101
N
BTMF_0000491701
Brugia timori
BTMF_0000491701
N
ANCDUO_17134
Ancylostoma duodenale
ANCDUO_17134
N
ANCCEY_09798
Ancylostoma ceylanicum
ANCCEY_09798
N
WUBG_09667
Wuchereria bancrofti
WUBG_09667
N
ANCCAN_08777
Ancylostoma caninum
ANCCAN_08777
N
Alligator_sinensis_CCG000426.1
Alligator sinensis
Alligator_sinensis_CCG000426.1
N
SINV23671
Solenopsis invicta
SINV23671
N
MCINX001578
Melitaea cinxia
MCINX001578
N
Bm7944
Brugia malayi
Bm7944
N
BGIBMGA013354
Bombyx mori
BGIBMGA013354
N
ACEP20274
Atta cephalotes
ACEP20274
N