GSMUA_Achr10G27680_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr10G27680_001 T002289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TINY
M01094_2.00 		Arabidopsis thaliana
NHRCCGACAN
NTGTCGGYDN		 PBM
Lambert et al.(2019)
pTH11541 		0.765 0.960
TINY
M06669_2.00 		Arabidopsis thaliana
HNYCRCCGACANHDN
NHDNTGTCGGYGRND		 Dap-seq
OMalley et al.(2016)
TINY_col_a 		0.765 0.960
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.762 0.920
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.762 0.920
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.762 0.920
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.747 0.900
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.747 0.900
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.735 0.880
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.735 0.880
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.711 0.880
AT3G16280
M06618_2.00 		Arabidopsis thaliana
NDNCACCGACANHN
NDNTGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
AT3G16280_col_a 		0.702 0.860
AT3G16280
M06619_2.00 		Arabidopsis thaliana
BCACCGACAHWNNN
NNNWDTGTCGGTGV		 Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a 		0.702 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P27680_001 AP2 56 107

Links

Other AP2 family TFs
Other Musa acuminata TFs

406 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DUXA Homo sapiens ENSG00000258873 D
DUXA Microcebus murinus ENSMICG00000006042 I
ENSMMUP00000010232 Macaca fascicularis ENSMMUP00000010232 I
ENSBTAP00000049813-D1 Bos grunniens ENSBTAP00000049813-D1 I
NEMVEDRAFT_v1g92500 Nematostella vectensis NEMVEDRAFT_v1g92500 I
NEMVEDRAFT_v1g92436 Nematostella vectensis NEMVEDRAFT_v1g92436 I
NEMVEDRAFT_v1g38792 Nematostella vectensis NEMVEDRAFT_v1g38792 I
DUXA Tursiops truncatus ENSTTRG00000014200 I
DUXA Pan troglodytes ENSPTRG00000028871 I
ENSPPYG00000010457 Pongo abelii ENSPPYG00000010457 I
ENSPANG00000009357 Papio anubis ENSPANG00000009357 I
DUXA Oryctolagus cuniculus ENSOCUG00000011331 I
ENSOARG00000003446 Ovis aries ENSOARG00000003446 I
DUXA Macaca mulatta ENSMMUG00000007788 I
ENSAMEG00000004960 Ailuropoda melanoleuca ENSAMEG00000004960 I
DUXA Gorilla gorilla ENSGGOG00000005650 I
DUXA Felis catus ENSFCAG00000007545 I
DUXA Equus caballus ENSECAG00000021112 I
ENSDNOG00000046863 Dasypus novemcinctus ENSDNOG00000046863 I
ENSDNOG00000025505 Dasypus novemcinctus ENSDNOG00000025505 I
ENSCSAG00000001657 Chlorocebus sabaeus ENSCSAG00000001657 I
ENSCJAG00000032154 Callithrix jacchus ENSCJAG00000032154 I
ENSCJAG00000031259 Callithrix jacchus ENSCJAG00000031259 I
ENSCJAG00000021948 Callithrix jacchus ENSCJAG00000021948 I
DUXA Canis familiaris ENSCAFG00000002431 I