GSMUA_Achr1G00070_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr1G00070_001 T002308_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.793 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.793 0.920
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.777 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P00070_001 AP2 227 278

Links

Other AP2 family TFs
Other Musa acuminata TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G54787 Brachypodium distachyon BRADI2G54787 I 0.000
BGIOSGA031750 Oryza indica BGIOSGA031750 N 0.000
GRMZM2G379656 Zea mays GRMZM2G379656 N 0.000
LPERR10G09060 Leersia perrieri LPERR10G09060 N 0.000
OB10G19740 Oryza brachyantha OB10G19740 N 0.000
OBART10G12450 Oryza barthii OBART10G12450 N 0.000
OGLUM10G12240 Oryza glumaepatula OGLUM10G12240 N 0.000
OLONG_012079 Oryza longistaminata OLONG_012079 N 0.000
ONIVA10G11720 Oryza nivara ONIVA10G11720 N 0.000
OPUNC10G10710 Oryza punctata OPUNC10G10710 N 0.000
ORGLA10G0110500 Oryza glaberrima ORGLA10G0110500 N 0.000
ORUFI10G13160 Oryza rufipogon ORUFI10G13160 N 0.000
EHD1 Oryza sativa OS10G0463400 N 0.000
Sb01g019980 Sorghum bicolor Sb01g019980 N 0.000
Si039992m.g Setaria italica Si039992m.g N 0.000