CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_45501
(
Hordeum vulgare
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
MLOC_45501
T002703_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q84ND8_HORVU
M09719_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF11_01
0.715
0.929
Q84JE9_HORVU
M09718_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF13_01
0.715
0.929
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_45501.1
AP2
12
55
CGFRGVRQRTWGKWVAEIRESNRVSRLWLGTFPTAEVAAQAYDE
MLOC_45501.2
AP2
75
104
CGFRGVRQRTWGKWVAEIRESNRVSRLWLG
Links
Other
AP2
family TFs
Other
Hordeum vulgare
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q84JE9_HORVU
Hordeum vulgare
Q84JE9_HORVU
D
0.715
Q84ND8_HORVU
Hordeum vulgare
Q84ND8_HORVU
D
0.715
MLOC_77405
Hordeum vulgare
MLOC_77405
I
0.715
gw1.81.143.1
Physcomitrella patens
gw1.81.143.1
I
0.682