MTR_1g070045 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g070045 T002786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.753 0.740
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.753 0.740
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.749 0.740
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.721 0.800
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.716 0.820
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.716 0.820
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.716 0.820
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.716 0.820
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.716 0.820
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.714 0.740
ERF15
M00718_2.00 		Arabidopsis thaliana
NGSCGSCB
VGSCGSCN		 PBM
Chang et al.(2013)
pTH7336 		0.710 0.800
ERF15
M06604_2.00 		Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY
RHGGCGGCKVHDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF15_colamp_a 		0.710 0.800
ERF15
M06605_2.00 		Arabidopsis thaliana
NNYHDYMGCCGCCRY
RYGGCGGCKRHDRNN		 Dap-seq
OMalley et al.(2016)
ERF15_col 		0.710 0.800
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.710 0.760
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.710 0.760
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.707 0.720
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.701 0.760
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.701 0.760
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.701 0.760
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.694 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH42544 AP2 64 116

Links

Other AP2 family TFs
Other Medicago truncatula TFs

669 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm001671 Prunus mume Pm001671 N
SapurV1A.3860s0010 Salix purpurea SapurV1A.3860s0010 N
SapurV1A.1951s0040 Salix purpurea SapurV1A.1951s0040 N
SapurV1A.1066s0010 Salix purpurea SapurV1A.1066s0010 N
SapurV1A.0977s0060 Salix purpurea SapurV1A.0977s0060 N
orange1.1g025739m.g Citrus sinensis orange1.1g025739m.g N
Gorai.013G266400 Gossypium raimondii Gorai.013G266400 N
evm.TU.supercontig_34.221 Carica papaya evm.TU.supercontig_34.221 N
Eucgr.J00637 Eucalyptus grandis Eucgr.J00637 N
Ciclev10016383m.g Citrus clementina Ciclev10016383m.g N
mgf016309m Mimulus guttatus mgf016309m N
Cucsa.142580 Cucumis sativus Cucsa.142580 N
30089.m001012 Ricinus communis 30089.m001012 N
GLYMA13G03880 Glycine max GLYMA13G03880 N
Cla011265 Citrullus lanatus Cla011265 N
Ca_10228 Cicer arietinum Ca_10228 N
VIT_06s0009g01790 Vitis vinifera VIT_06s0009g01790 N
TCM_042034 Theobroma cacao TCM_042034 N
Solyc01g008980.2 Solanum lycopersicum Solyc01g008980.2 N
PRUPE_ppa022266mg Prunus persica PRUPE_ppa022266mg N
POPTR_0009s02360 Populus trichocarpa POPTR_0009s02360 N
POPTR_0001s22790 Populus trichocarpa POPTR_0001s22790 N
PGSC0003DMG400022706 Solanum tuberosum PGSC0003DMG400022706 N
MTR_5g088230 Medicago truncatula MTR_5g088230 N
GLYMA20G10600 Glycine max GLYMA20G10600 N