CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART02G04420
(
Oryza barthii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OBART02G04420
T003080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART02G04420.1
AP2
22
72
VRYRGVRRRPSGRYAAEIRDPAKKTPIWLGTFDSAEAAARAYDAAASTVES
Links
Other
AP2
family TFs
Other
Oryza barthii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G052720
Zea mays
GRMZM2G052720
N
0.732
GRMZM2G175543
Zea mays
GRMZM2G175543
N
0.754
GRMZM2G322672
Zea mays
GRMZM2G322672
N
0.712
LPERR02G03850
Leersia perrieri
LPERR02G03850
N
0.754
LPERR06G21240
Leersia perrieri
LPERR06G21240
N
0.732
OGLUM02G04330
Oryza glumaepatula
OGLUM02G04330
N
0.754
ONIVA02G04420
Oryza nivara
ONIVA02G04420
N
0.754
ORGLA02G0040900
Oryza glaberrima
ORGLA02G0040900
N
0.754
Sb10g028110
Sorghum bicolor
Sb10g028110
N
0.709
Pavir.Db00303
Panicum virgatum
Pavir.Db00303
N
0.754