OGLUM04G19330 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM04G19330 T003239_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.824 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.824 0.920
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.808 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM04G19330.1 AP2 213 264

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Arid2 Mus musculus ENSMUSG00000033237 I 0.000
arid2 Tetraodon nigroviridis ENSTNIG00000005771 N 0.000
ENSONIG00000011901 Oreochromis niloticus ENSONIG00000011901 N 0.000
ARID2 Procavia capensis ENSPCAG00000015312 N 0.000
ENSPFOG00000011270 Poecilia formosa ENSPFOG00000011270 N 0.000
ENSPPYG00000004433 Pongo abelii ENSPPYG00000004433 N 0.000
ARID2 Pan troglodytes ENSPTRG00000004853 N 0.000
Arid2 Rattus norvegicus ENSRNOG00000004831 N 0.000
ENSSTOG00000008936 Ictidomys tridecemlineatus ENSSTOG00000008936 N 0.000
ENSTGUG00000006070 Taeniopygia guttata ENSTGUG00000006070 N 0.000
ENSOARG00000019554 Ovis aries ENSOARG00000019554 N 0.000
arid2 Takifugu rubripes ENSTRUG00000004073 N 0.000
ENSTSYG00000008152 Tarsius syrichta ENSTSYG00000008152 N 0.000
Aan_R012350 Calypte anna Aan_R012350 N 0.000
Afo_R010305 Aptenodytes forsteri Afo_R010305 N 0.000
Brh_R012991 Buceros rhinoceros Brh_R012991 N 0.000
Gfo_R004053 Geospiza fortis Gfo_R004053 N 0.000
Ogr00113 Ophisaurus gracilis Ogr00113 N 0.000
Pvit_11514 Pogona vitticeps Pvit_11514 N 0.000
arid2 Xenopus tropicalis XB-GENE-6070950 N 0.000
arid2 Gasterosteus aculeatus ENSGACG00000019522 N 0.000
ENSAMEG00000013404 Ailuropoda melanoleuca ENSAMEG00000013404 N 0.000
ENSAMXG00000012189 Astyanax mexicanus ENSAMXG00000012189 N 0.000
ENSAPLG00000010567 Anas platyrhynchos ENSAPLG00000010567 N 0.000
ARID2 Canis familiaris ENSCAFG00000009335 N 0.000
ARID2 Callithrix jacchus ENSCJAG00000013099 N 0.000
arid2 Danio rerio ENSDARG00000007413 N 0.000
ENSFALG00000010156 Ficedula albicollis ENSFALG00000010156 N 0.000
ARID2 Felis catus ENSFCAG00000012831 N 0.000
ARID2 Homo sapiens ENSG00000189079 N 0.000
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.000
ENSGALG00000009665 Gallus gallus ENSGALG00000009665 N 0.000
ARID2 Gorilla gorilla ENSGGOG00000013896 N 0.000
ENSGMOG00000016013 Gadus morhua ENSGMOG00000016013 N 0.000
ENSLOCG00000016423 Lepisosteus oculatus ENSLOCG00000016423 N 0.000
ARID2 Meleagris gallopavo ENSMGAG00000009656 N 0.000
ENSMPUG00000000380 Mustela putorius furo ENSMPUG00000000380 N 0.000
ENSNLEG00000017919 Nomascus leucogenys ENSNLEG00000017919 N 0.000
ARID2 Anolis carolinensis ENSACAG00000002402 N 0.000