ONIVA05G18720 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA05G18720 T003610_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.810 0.920
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.810 0.920
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.810 0.920
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.810 0.920
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.799 0.880
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.799 0.880
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.740 0.840
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.714 0.840
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.714 0.840
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.714 0.840
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.712 0.820
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.712 0.820
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.712 0.820
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.711 0.760
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.709 0.820
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.704 0.800
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.679 0.780
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.679 0.780
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.679 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA05G18720.1 AP2 163 214

Links

Other AP2 family TFs
Other Oryza nivara TFs

555 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Foxj1 Mus musculus ENSMUSG00000034227 D
FOXJ1 Homo sapiens ENSG00000129654 D
ENSOARG00000007895 Ovis aries ENSOARG00000007895 I
ENSAMEG00000010217 Ailuropoda melanoleuca ENSAMEG00000010217 I
FOXJ1 Oryctolagus cuniculus ENSOCUG00000011472 I
FOXJ1 Otolemur garnettii ENSOGAG00000026625 I
ENSONIG00000019769 Oreochromis niloticus ENSONIG00000019769 I
FOXJ1 Ochotona princeps ENSOPRG00000011410 I
ENSPANG00000020054 Papio anubis ENSPANG00000020054 I
FOXJ1 Procavia capensis ENSPCAG00000015387 I
ENSPFOG00000004597 Poecilia formosa ENSPFOG00000004597 I
ENSPMAG00000006623 Petromyzon marinus ENSPMAG00000006623 I
ENSPPYG00000008652 Pongo abelii ENSPPYG00000008652 I
FOXJ1 Pan troglodytes ENSPTRG00000009674 I
ENSSHAG00000017120 Sarcophilus harrisii ENSSHAG00000017120 I
FOXJ1 Sus scrofa ENSSSCG00000017187 I
ENSSTOG00000021584 Ictidomys tridecemlineatus ENSSTOG00000021584 I
foxj1b Takifugu rubripes ENSTRUG00000016940 I
FOXJ1 Tursiops truncatus ENSTTRG00000015916 I
ENSP00000323880-D1 Bos grunniens ENSP00000323880-D1 I
BGLB014205 Biomphalaria glabrata BGLB014205 I
ENSMPUG00000013521 Mustela putorius furo ENSMPUG00000013521 I
CapteG222987 Capitella teleta CapteG222987 I
FOXJ1 Bos taurus ENSBTAG00000007916 I
FOXJ1 Canis familiaris ENSCAFG00000005050 I
FOXJ1 Callithrix jacchus ENSCJAG00000013682 I
ENSCPOG00000010965 Cavia porcellus ENSCPOG00000010965 I
ENSCSAG00000004998 Chlorocebus sabaeus ENSCSAG00000004998 I
FOXJ1 Dasypus novemcinctus ENSDNOG00000036643 I
FOXJ1 Equus caballus ENSECAG00000014390 I
foxj1b Gasterosteus aculeatus ENSGACG00000004462 I
FOXJ1 Gorilla gorilla ENSGGOG00000007282 I
FOXJ1 Loxodonta africana ENSLAFG00000032043 I
ENSMEUG00000007843 Macropus eugenii ENSMEUG00000007843 I
FOXJ1 Myotis lucifugus ENSMLUG00000006595 I
FOXJ1 Macaca mulatta ENSMMUG00000003533 I
FOXJ1 Monodelphis domestica ENSMODG00000008306 I
FOXJ1 Ornithorhynchus anatinus ENSOANG00000014384 I
FOXJ1 Felis catus ENSFCAG00000005772 I
SVUK_0000985101 Strongylus vulgaris SVUK_0000985101 N
NECAME_00093 Necator americanus NECAME_00093 N
NBR_0000590001 Nippostrongylus brasiliensis NBR_0000590001 N
HPLM_0000504501 Haemonchus placei HPLM_0000504501 N
HCOI01523700 Haemonchus contortus HCOI01523700 N
DICVIV_12096 Dictyocaulus viviparus DICVIV_12096 N
ANCDUO_06348 Ancylostoma duodenale ANCDUO_06348 N
ANCCEY_04131 Ancylostoma ceylanicum ANCCEY_04131 N
ANCCAN_00168 Ancylostoma caninum ANCCAN_00168 N