ONIVA11G10300 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA11G10300 T003674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.859 0.837
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.859 0.837
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.842 0.837
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.842 0.837
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.829 0.817
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.829 0.817
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.817 0.837
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.817 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA11G10300.1 AP2 175 232
ONIVA11G10300.1 AP2 274 326

Links

Other AP2 family TFs
Other Oryza nivara TFs

526 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VAX1 Echinops telfairi ENSETEG00000014224 N
ENSTSYG00000003329 Tarsius syrichta ENSTSYG00000003329 N
MEOX2 Tupaia belangeri ENSTBEG00000015237 N
EMX1 Pteropus vampyrus ENSPVAG00000016384 N
DLX6 Pteropus vampyrus ENSPVAG00000004462 N
BSX Procavia capensis ENSPCAG00000012587 N
MEOX2 Procavia capensis ENSPCAG00000009564 N
MEOX1 Procavia capensis ENSPCAG00000002856 N
CDX4 Microcebus murinus ENSMICG00000011271 N
MEOX1 Microcebus murinus ENSMICG00000005601 N
ENSMEUG00000014282 Macropus eugenii ENSMEUG00000014282 N
ENSMEUG00000006366 Macropus eugenii ENSMEUG00000006366 N
BSX Choloepus hoffmanni ENSCHOG00000003439 N
EMX1 Echinops telfairi ENSETEG00000012434 N
MEOX1 Echinops telfairi ENSETEG00000004552 N
ENSETEG00000000320 Echinops telfairi ENSETEG00000000320 N
DLX6 Erinaceus europaeus ENSEEUG00000010934 N
BARX1 Erinaceus europaeus ENSEEUG00000010760 N
MEOX1 Erinaceus europaeus ENSEEUG00000004859 N
ENSDORG00000016600 Dipodomys ordii ENSDORG00000016600 N
Dbx2 Dipodomys ordii ENSDORG00000008308 N
ENSDORG00000007201 Dipodomys ordii ENSDORG00000007201 N
MNX1 Choloepus hoffmanni ENSCHOG00000006059 N